Search result

BaseInfo

ncRNA ID novel_gma_miR1393
Species Glycine max
Class miRNA
Genome position Chr17:10821141-10821191 [+]
Reference genome Glycine_max_v2.0
Source SRR1451644;SRR835759;SRR835768
Length 22
Mature sequence(if miRNA) 1 - UUUGAAUCUCAUGGUUUCGUGA - 22
Stem-loop(if miRNA) ---U    A      - G      GA
    UUGA UCUCAU G UUUCGU  A
    |||| |||||| | ||||||  G
    GAUU AGAGUA U AAGGUA  G
AUAC    C      A G      AA
Stem-loop sequence UUUGAAUCUCAUGGUUUCGUGAAGGAAAUGGAAGUAAUGAGACUUAGCAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014764111.1
ncRNA:22   AGUGCUUUGGUACUCUAAGUUU   1
  *||=||||||||||||||||||
targets:7319   ACAUGAAACCAUGAGAUUCAAA   7340

1.0 PREDICTED: Glycine max uncharacterized LOC106795195 (LOC106795195), transcript variant X2, mRNA uncharacterized LOC106795195(LOC106795195) coding protein psRNATarget
XM_014764110.1
ncRNA:22   AGUGCUUUGGUACUCUAAGUUU   1
  *||=||||||||||||||||||
targets:7448   ACAUGAAACCAUGAGAUUCAAA   7469

1.0 PREDICTED: Glycine max uncharacterized LOC106795195 (LOC106795195), transcript variant X1, mRNA uncharacterized LOC106795195(LOC106795195) coding protein psRNATarget