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BaseInfo

ncRNA ID novel_gma_miR1383
Species Glycine max
Class miRNA
Genome position Chr16:3536324-3536483 [+]
Reference genome Glycine_max_v2.0
Source SRR1451644;SRR1451613;SRR1451621
Length 21
Mature sequence(if miRNA) 140 - AUGUGGAUGAUAUGAAAGACA - 160
Stem-loop(if miRNA) --C                 A  C   -C   U      CUC      C       A   C           C    CUCUG
   CUUUCGUAUCAUUCACA AA UUG  UCC CUUUCU   CUCUAU AAAUAAA UUU UAUUUCACCAU CAUA     U
   ||||||||||||||||| || |||  ||| ||||||   |||||| ||||||| ||| ||||||||||| ||||
   GAAAGUAUAGUAGGUGU UU AAC  AGG GAAAGA   GAGAUG UUUAUUU AAA AUAAAGUGGUA GUAU     C
ACA                 A  C   AA   -      --U      A       C   C           A    UAUAA
Stem-loop sequence CCUUUCGUAUCAUUCACAAAACUUGCUCCUCUUUCUCUCCUCUAUCAAAUAAAAUUUCUAUUUCACCAUCCAUACUCUGUCAAUAUUAUGAAUGGUGAAAUACAAACUUUAUUUAGUAGAGUAGAAAGGGAAACAACUUAUGUGGAUGAUAUGAAAGACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006576037.2
ncRNA:21   ACAGAAAGUAUAGUAGGUGUA   1
  |*||||*=||||||||||||*
targets:648   UCUCUUGUAUAUCAUCCACAC   668

3.0 PREDICTED: Glycine max uncharacterized LOC102662367 (LOC102662367), mRNA uncharacterized LOC102662367(LOC102662367) coding protein psRNATarget