ncRNA ID | novel_gma_miR1383 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr16:3536324-3536483 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451644;SRR1451613;SRR1451621 |
Length | 21 |
Mature sequence(if miRNA) | 140 - AUGUGGAUGAUAUGAAAGACA - 160 |
Stem-loop(if miRNA) |
--C                 A  C   -C   U      CUC      C       A   C           C    CUCUG    CUUUCGUAUCAUUCACA AA UUG  UCC CUUUCU   CUCUAU AAAUAAA UUU UAUUUCACCAU CAUA     U    ||||||||||||||||| || |||  ||| ||||||   |||||| ||||||| ||| ||||||||||| ||||    GAAAGUAUAGUAGGUGU UU AAC  AGG GAAAGA   GAGAUG UUUAUUU AAA AUAAAGUGGUA GUAU     C ACA                 A  C   AA   -      --U      A       C   C           A    UAUAA |
Stem-loop sequence | CCUUUCGUAUCAUUCACAAAACUUGCUCCUCUUUCUCUCCUCUAUCAAAUAAAAUUUCUAUUUCACCAUCCAUACUCUGUCAAUAUUAUGAAUGGUGAAAUACAAACUUUAUUUAGUAGAGUAGAAAGGGAAACAACUUAUGUGGAUGAUAUGAAAGACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006576037.2 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC102662367 (LOC102662367), mRNA | uncharacterized LOC102662367(LOC102662367) | coding protein | psRNATarget |