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BaseInfo

ncRNA ID novel_gma_miR1372
Species Glycine max
Class miRNA
Genome position Chr13:31904862-31904945 [-]
Reference genome Glycine_max_v2.0
Source SRR1451644
Length 21
Mature sequence(if miRNA) 1 - AAAUAGAACUUCAAUUUUAAU - 21
Stem-loop(if miRNA) --                             -         A
  UAAAAUUGGAGUUUUGUUUUGAUAAUUUA CGUAAUAAA A
  ||||||||||||||||||||||||||||| ||||||||| G
  AUUUUAACUUCAAGAUAAAAUUAUUAAAU GUAUUAUUU U
UA                             A         U
Stem-loop sequence UAAAAUUGGAGUUUUGUUUUGAUAAUUUACGUAAUAAAAAGUUUUUAUUAUGAUAAAUUAUUAAAAUAGAACUUCAAUUUUAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014778303.1
ncRNA:21   UAAUUUUAACUUCAAGAUAAA   1
  ||||=||||||||||=|||||
targets:778   AUUAGAAUUGAAGUUUUAUUU   798

2.5 PREDICTED: Glycine max serine-threonine kinase (LOC100305392), transcript variant X1, mRNA serine-threonine kinase(LOC100305392) coding protein psRNATarget
XM_006605958.2
ncRNA:21   UAAUUUUAACUUCAAGAUAAA   1
  *||||=|*||||||||||||*
targets:1288   UUUAAGAAUGAAGUUCUAUUA   1308

3.0 PREDICTED: Glycine max uncharacterized LOC100790058 (LOC100790058), mRNA uncharacterized LOC100790058(LOC100790058) coding protein psRNATarget