Search result

BaseInfo

ncRNA ID zma_circ_000485
Species Zea mays
Class circRNA
Genome position 9:136151722-136154127[-/+]
Reference genome AGPv3.22
Source PlantcircBase
Method SMALT and Segemehl
Type intronic
Splice junction sequence CTTGTGGCGCTCTCTGCAGGTGGAGGGAGGCGAGGGGCGAGGAGAATCCAGGCGCGTGTGCTGAGAGGGGCAAGCCTGTTTCTGTTTATATAGAGCTCGTTACCTCTTCCTCCATGGACGCCGATGACTTGGCTCCATCACAGCCTGCCATCTCTTCCTCCTCTTGTCTCCCTTGTCCGCTACTGCTAGAACGAAGCGCT
Tissues shoot
Exon boundary Yes-No
Splicing signals AC-CT
circRNA sequence NA
Genomic sequence CTTGTGGCGCTCTCTGCAGGTGGAGGGAGGCGAGGGGCGAGGAGAATCCAGGCGCGTGTGCTGAGAGGGGCAAGCCTGTTTCTGTTTATATAGAGCTCGTGTACGGCCATACGAGGAGGAGAGATCACACACAGCTGGGGCAACAGCACAGGATGGGATCGCCTGCCTTCTCCCTCCGAACCCGAAGGTAGGAGTGCCCAGTTAGCTGCTCTCCACCGTTAAAGGAATCGAACGGTTGGCAGCAGATTGACAGTATTTCTCTGCTTTGATGCTGGAACAGAATAAATCAAGTATACATACACATAAACAAGGCCAATAAATTGGGATCAAACTAGTTCATTCCAGCAGCAAGTATGGAGTTGAAACCATTTAAATAAACAAAAAAAATAGTACCAAGATTTAATTGAAACTAAATGCAGGCTGAGATTGACTGCATGCTCGTATTTTTATCTCCAAAAGATATATAGAACAATAATACATTTAGTTCAAAATACAGCAAGACATTTAGTTCTAGTTTTAGCTCGTGGCCGTTTACAAGATGACTTATTTTACCTTATTTTCCGCTGACCCTCTCTTGCACAAATAAATCTAAATGATGTCACTATTCCAACAGATTTTCTTTTGTTTGCATATCTCTTTTTAACCTCAAAACCGTGTTACTCCATATGTATTACAAAACTTCCAAGACTCTACCTCATCCTGAAACTTCATGCCAATTTCAGGCACCATAACAGGAAGTACGCCATGTCTAAAACATCAAGAGCAGGGTCTCAATTTTCCTTATGAGCAATAAAACAATAGAAGAACAACAAACATGAGAGTTCTATCTTTGACATGCTGCCTCCGGGATCATCTCCTACCTCTCCATTCTTAACAAGAGGTGTATATTGTCTAAAAACAGATAACAAGCTAGCAGTTTGCACAATATTATTGTTCTTCGTAAACTATCAAAAATCAGAAGAAGAATAAGTATGGGTGTTGTATTATTTGCCTTTTGTCTTCTTGATAATTCTTGTTCGGATCTTCTTCCATTAGGGATGTTATATCTCAATGTGAGAGAGAGAAAAGGAAGAAGAGATGATGCTCAGGTTGCAGAATGGAGGTTTCTGGTGCCAAAACAGAGCAAGGAGGCATTTTCCCTCCATACGGCAATAAATGCAGGTCGTTTCCCTCCACTTCGTCTGTTTCCCGCGGCATCATGTTTCGATTCATCCAACCTTTAGAGGGCGAAGGCAGACGATCCCAATCCAACAGCACAGACTCCATGCATAATCGCATATGGGTCCTAGTCGACACGGAGGATCCTCATCCCGCAAGAATGCTACAGTTAGGCCCCATTAAATTCAAGGGTATTCAATGAATATCCATTATTTTTTGCAAAAAAATTTCGATATATACATGTATGTAGTGTATATACATGGAAATAGAAAATCAATCAAATAAATGAAGAAATTCTGCTAATTTGAACCAAAATATCTCCTTCCTACATCTCATACCTAACTAGCTCAATAGATTCTCGTGGCCCATGTGGCCATGAGACCCAACGAAGTGACAAAGTCCACCTTATTACCTCATAGCAAAAAATCTCTAAACTATATTGTAGTCGCACCACGACAGAGCCACCAAAGCGCCAGCCGCCAAGTCATGGTCGTGTCTTGCCGCCCCATGTGCCCACATGGAGACACTAGCACTTTTGTCGCGCCACCGCGTCATCGCTAGGTGCCCATACCTAACTGGCTAATTGTTGTCGTCGCGTTGCACCTGACCTCATTGCTGTACCGACCGTCGTCTGAGGCTTCGATCCGTCGCAGTCAGGGCACCATCACGTGCAAGTACAAACCGCCATGGGGCAGGGTCCCATCATGTCAATGTCCAAGCTCGCCTGGCTGGTGGCCACCCGATCGTGACCTCTCCTGCTTGACCGCTTCCAGTACTTGGCTGCAGGTGAAGCCAGTAAGAGTTCCTTCGATGTATAATAATTGTGTATCAAAATTGAGACATTCCATTGCTCTGGGCTCTGCAAAACTCCAACTCTATCGATGCGTGTACTAAGTTAAGTTCCAATGAAAACTACCCCACCAAAAAAAGTTCGTTTTGAGGCTAATAATCCAGAAATTAATCAAAGCAGGGCAGTATTGATCCAAGTAGTCAGGTAGGGGAAATGAACAAGGCATGCATATACAATGCATGTGCAGCAAGCAAGTAACAACTGATGATGGATAACATGTGAACTGCAACCTCTAGCCTAGCTTGATTCCTTTTCTTCGGCCAAGAATCATGCCAGTTCACAGAAACTATGCACAAATTACCTCTTCCTCCATGGACGCCGATGACTTGGCTCCATCACAGCCTGCCATCTCTTCCTCCTCTTGTCTCCCTTGTCCGCTACTGCTAGAACGAAGCGCT