Search result

BaseInfo

ncRNA ID	zma_circ_000480
Species	Zea mays
Class	circRNA
Genome position	9:109326566-109332173[-]
Reference genome	AGPv3.22
Source	PlantcircBase
Method	SMALT and Segemehl
Type	exonic
Splice junction sequence	TCGACGTCGAAGAGGAGCGTGGAGTTCGGCGGGATGACGCACGAGGTGGGCTCCCACCCTCTGCACCCAGCACCCTTCTCGCCGTAGGCCAGCGCCGGTGATATCAAACTTTATTCTACAAATAATATTAAACATTGTAATCTACGGTTCTGTGTACCTATTTTACATTATTCGTTGGAGTAGACTGTCTTCGGTGGATC
Tissues	shoot
Exon boundary	No-No
Splicing signals	AC-CT
circRNA sequence	NA
Genomic sequence	TCGACGTCGAAGAGGAGCGTGGAGTTCGGCGGGATGACGCACGAGGTGGGCTCCCACCCTCTGCACCCAGCACCCTTCTCGCCGTAGGCCAGCGCCGGTGGCAGCTTCAGCGTCCGCTTACCCCCTGAAGAACAAGAAACGTATCCACGAACGGAATGTAATTCAGCAAAAGCCAATCGGTAGTCGTTGCTGGGTTCAGTGTTTGACGTACCAGCGAGCATCGGCGGGATCCCTTCGCCGCCAACAATACCCTGATCCCATCCTTTGATCACCTGGTGCAGAAGGATAATAGACACTTGTAACATACTTTGATCACCTAGCGTGAGCGCGTGACAGACAGACAGTGTACGCAGGGGCATGACATCGGTACCTCTCCGACGCCAACGCGGAAGGTGAGCGGCTTCCCGCGCTTGTAGCTGCTGTCGAACACCGTGCCGTCCTCCAGCCTCCCCGTGTAATGCGCCTGCACGCACCGAGCGATGCAGATGAGACGAGAGAGAGAGAGATCATCTTTAAGGACGACGACCGGTAGGTACAGACCCTGATGAGCTGTCCCTCCTGGGCGGCGGCGCCGGTGCCGACGACGCGGTCGCAGAAGGCGAGCCCGGACGGCGCCACCTCCAGCGGGCACTCCCCGCCGTCCGCGGCGGCCGCGGGGAGGGCGAAGCGGGAGAGAAAGGCGGTCGACAGCAGGGCGGCCGCTGCCTCGCGCCGCCGGAGGACGAGGCCGGGGCTCCTGGCCGCGGCGACGTCCGGGCGAGGCTGCGAAGGAGAGGAGGAGGAGGAGGAGGAGCGGGGGTGCTTCGCGGCGCCTGGCTTCGGGAGGCTGAGGAGGAGCCGGGACAGCGGCTGCGCGGAGGTGGACGCGCCCGGACCCATGGCTGCCTGATGGCGCGGAGGAGAGGCTGCCGTTGCCGTTGCTCCCGATAAGGCGACGCGGGTCGGCGCTTCTGAATTGTGGTGGACTGCTGGCGATTTCCGCGGTGAACTTGTGACGGAGATAGTTTGGGCCGTGCTAGAGAGAGAGAGAAAAGCCCAAGCCCGTCGCGTCGGTTCAGTGAGGCCCAGAGGGTGATCAACCGAACAGCAGTGTAACCCGAAGCAAATCTTGGCCCGCCAACATGGGTGCACTAGTCGAAATCTGCGTTGCGTGACGGGAACCATCGCCATAAAACACCGCGGCACGTGCCCCCGGGTTCGGCGGCCGGCGGCCTGCAGTGCGCTCCGAAAATCTCGCGTGGGCGGGCGGGCGACCGGGGTAATAAAAAGCGGGTAGGTTCCGGTCGATCTCACTTTCCTATCCGTCACGCAGGCCCGGGGCGCACTCTCCGCATGTGCGCTGCTGCCGTTGGCCGTTGCACGCCCCGAGCGGACCAGGTCACCGGCGACGAGGACGGCCACGTTTCCTCGCAAAGCCAAAGCCAGACACGCCAATCGCTCCTGTGATCGCGGTGGGGAACCACATGGACGCGTCACGGCATCAGTTACTCGGTTGACAGCAAAGGCAGAGTCGTACGGGGGGACGGTTAGGCCCAGCAAGCACGAGATTAAAAAATAATCTTTTTTTTTGTTTGCCGAAGTCAAGACTCAAAGTCTGAGAAACTGACTTGCTGGATCCCCCCCCCCCCCTCATCTGCTCGTGATGGGAGCAAATTCCTGTGTTCCACCACGCGCCATATGCAGGCGCCCGCAACCGCAACTAGAAATTGCGAACTTGTCGAGGTAACAGTCACAGTAAGGGCCTGTTTGTTTACCCCTATGGATTATATAATCTGGATTATTTTTGGAGGATTATATAATCTGGATTATATAATCTGAATTATATAATCTGAGTAGTCCTGTTTGTTTACCCAGATTATTTGAGTTGTTAATAGGATTCTTTTGTATGAGGAAGACAAGAATGCCCTCTACATTTGTACTAGGTTGAAACTCATATATGAAAAAAAATAATTCAATTGACATTGGCAAATATTGCATTAACAATATTATCACGGAAGGCATTATGTCACCTTCTTCATCCCCAAATTGACTAGTACTAGGCACAAAAACGATTCGGTGGATTATAATGGCAATGGTGGGTAATTTCTAGGAAACTTGAAAGGGTAGTGGAGAAGTGAGAAAAAAATAATCTGAAATAAGCACCTCCTCACTTGCTTATGGATTATCATAATCCAAGGGGTTAGATTATATAATCTGGGCAAATAAGCTGGACTGTTTGTTTGCCACTTAGGATTATTTAATCCAGATTATATAATCTGGAGGGTAAACAAACAGTCCCTAAGTCGTAACATTATCGGTACATGGAGTCGTTGACCTGCTCAGCCATTCTCCAACCCAACCCCACGAAGCCAGACGTGCAACAAGCCCATTCCACTCCACCACGTCACTCAACACCATGGTGGTCCGTCCGTGGCGCCGCCGCCCGCCACCCAGCAAAGTGAAGCAGGCGGTCAAAAACAGAGCACAATCAGTGGAGCGTGACTTGGAGGAGCCGAACGAAGACCCAGCGCAGTGCTCGTGCTCGGCGGCGTTTGACCGGCGCGCCCGTCGTCTCTGTCCGACGCTAACAGCCACTTTAAATCCTTCCGTCCGGCGGCGAGCCTGTGGTGCTCTATAGCTGGGAATAGGGTATGCAGTCGCGTGTGCACGTTCGGCGAAGGGTAGGAGGCGGAGGTTGTGACCTGTCAGCGGCACGGCCACGGGGGTTTTATGGCGCCGTTTAATCTGACAGCGCCTCGATCGTACTACGGTGTACCCGTATACGTGCGCGTCGGGCTGGCGACGTCTTAATTTATTATTTAGCAGAGATAACCAGGGTGCCCTTCACACTTGCACGCACGCACCTGGGTTCTGCTAAAAACTGAGTTGAATGCCATAACACATGACAGGCACGCACTCTCGTTGGTTCTCGTCTCGTACAGGCAGGCAGTACCTAGGACAGACTGACAGAGCCACGGATGTGACACGTTCTGGAGGCGGCCGCGCTGGCGCGGAACCTGGAGAAGTGGATCCTGTGCTCGGCTCTGCCGCCCCACCGGCCCACCGGCGATGGAGTGAGCTGCCAAGCGTGCGTGAGCCGCGGCAGCTTTGCTTTGCTAGCGCCAGCAACGGAATCGGCGGGAGAGGACTAGAGGAAAGGGTTCGGTCCACCTGCTCCCGGCCGCAACGCACACGCACTCTGCACTGCAGGTTGCGCACGCTTGCACTTGGATAAGGTCTGGTGCAAATGGTGGTGCAGTAGTTCGAGCGTAGATTAAGTGGACCGCGCTCCTAATCCATGTTACCTATACCTCCCCGCGGATCAGTAGTGCACAGCGTCACAGCGCAGTGGACAGTCGCACGGTCTCAGAAGGTAGCTTGGTGTCGCGTTCCCCGCGCACGTAAAAAGAGAACCACAAAAGTGCTGTTGGAGTTAAGCACCACCGCTGCAGCTGCAGCCGCAAGTGCAGGCAGGAGTGGAAGGCGTGGAGTGGCGTCGGCCTGCGGTCCGCGTCTGCGGGAGTGCTTGCGCGCCGGGTTTTGTGCCAAGCCCCCCTCTTCTCTCTCGGCGCTTTTCTTGGTGGGAAACTTGTGCCGACCCGCTAACATCACACTCTACTACGCACTCCCATCGTGGACATGGGAGTCGTGTTCCTTCTTCACAAAGACGACTGTCGAGTGTCGACGACTGCTCCTCCGATCACGTCCGTTGTTCACTGTCATGTACGACTGCTTCTCACTAGTAAGTTTACTGGCACTGGCAGGCAAGGCAGCAAAACATCGGCAGGACGGCAGCCGGAGGCGTTCGTTCGTTCGAGCGTGGCCAGCAATTTGGAACCTGGGAGCCAGGGCACCGTGGGTGCAGTGCAGTAAATGAGGTGTTGCAATGGCGATTTATCGGGGGGTGGTGGTGGAGTGAATGGATCCACGAGTTTACGTTGGTGCTCAGTGCTGCTCTGCCAGCCAACGTCGGATCGTATTGATGCGTGCTTTTCCCTGGCTGTGAGGCCCCGCCGCCGTACCCCGTCCGTGCGTCATAGGATACGCGCGCAGGCAGGGGCAGCTTCGTGTCTGTGTCTGTGTCTGTCCAACGTGTTGTTGGCCGTGGATGAGGACGAGATGAGTAAACGCCCGCCGGCCATTCCATTCCATTCCGTTCCATGTGCTTTGGAGTGTGGGATTTCAACTTCCCGCAAGAGTGTCAGCGGCCCATACGTACGTAACTGTCCCTGTTCACTTGGCCCTAGCACTAGGCCACTAGCACTGCGGTTCCTGGTGGCGCAGTCACTGTGATGTGAGCCCCACAACCACAGTTTCTTTCTTTTCTCAACGTTTTTGGCCACCACACTGCTAGTATCTCTCTTTTTTTTGTCTGGCGTCCTCATTTCAAATTACAAAATGGCAGATACCGAAACACTACTGCTAAACGCACTTTAGGAGTGAATTTGTATCTCCTGCCAAAAAAAAAAAAGCTTAGCCCATGTTTGGAACCACGCAAGTTTTTTTTTTGTGAAAATAATAATTAGATGGACGTGTTTGGAACTCGATTTCTAAGAAACCAGTTTCTAATTTTTTTCACACATGATTATTAGCATACCCTTCCTATGTTTAAAAACGAAAGCAATAGATATAGATTTCATAAAACCTACAAGGACATGATGTCATTAAACAAACAAAAACTGGTATATCAGCTAGATGAGAGTAGCTTCTTTATTTTTAAGAAACCGAAAATACAATTTTAATAAACTAGGAAATTAGCTGATATATTTGAAACCACCATGGCTTCTGTAAAACCAGTTTCTTTAGAAACTGTATGCTGTCCGACAGACCCATATACTGTTTTCAGTCACGTCCTCTATATATATCTATTCTCTATATCTGCTCTTTACAGCCTCCTCTAAAAGATTTCATCCTCTATATCTTTTTCATCTCCAACAACGTCCTCTATACGCAAATACCTATATTAGAGTCATTTTTTATTTTTTATTTTTTGTACATACGTACTTGTCATGCTCTCAAATGCATTGGACATATTTTAGTTTTGCTAAATCGATTGTATAAAGTGTTCAAATGGATAGAAGAAATAAGGGAGAAACTGTATATATAAAGGATCTGTACTATAAATTTAAAAGGACCGTTTGAATGACGCTGCTGGAGTGAGTATAGGACAGAAATCTTCTCTACAATTAGAGTAGAGAGTGTTGAAGCCGGTCTTAATAGATCATCCGTATATTTCTACCTTCGTATTGAATTCTCTGCAATGGTACGTGTCTTGAACCTTTTAATGAGTGCCGATGTTGCTAGAGTATCTTTTTGGGAAGAAAGGATAGCAGGCTTTTTCAACTCAACCTTAAATGCCGCTACGTTTCGAAGGAAAGCGTGATCCATAATAAAGATTGTAGACCAGCATGCTACCATCCATACTCCGAGCCCTGTTTTGCAAAACTGAGGAGAAAAAACAATAGGGCATTCGAGTTTGTAGTACCATTACCATCCTTTGACCCTTAGACTATCTCTAGCAGATATCTTATATCAAACTTTATTCTACAAATAATATTAAACATTGTAATCTACGGTTCTGTGTACCTATTTTACATTATTCGTTGGAGTAGACTGTCTTCGGTGGATC