Search result

BaseInfo

ncRNA ID	zma_circ_000479
Species	Zea mays
Class	circRNA
Genome position	9:109326540-109332173[-]
Reference genome	AGPv3.22
Source	PlantcircBase
Method	SMALT and Segemehl
Type	intronic
Splice junction sequence	CTCAGCCGGTGGCTCTGCCGACGTACTCGACGTCGAAGAGGAGCGTGGAGTTCGGCGGGATGACGCACGAGGTGGGCTCCCACCCTCTGCACCCAGCACCATATCAAACTTTATTCTACAAATAATATTAAACATTGTAATCTACGGTTCTGTGTACCTATTTTACATTATTCGTTGGAGTAGACTGTCTTCGGTGGATC
Tissues	shoot
Exon boundary	No-No
Splicing signals	AC-CT
circRNA sequence	NA
Genomic sequence	CTCAGCCGGTGGCTCTGCCGACGTACTCGACGTCGAAGAGGAGCGTGGAGTTCGGCGGGATGACGCACGAGGTGGGCTCCCACCCTCTGCACCCAGCACCCTTCTCGCCGTAGGCCAGCGCCGGTGGCAGCTTCAGCGTCCGCTTACCCCCTGAAGAACAAGAAACGTATCCACGAACGGAATGTAATTCAGCAAAAGCCAATCGGTAGTCGTTGCTGGGTTCAGTGTTTGACGTACCAGCGAGCATCGGCGGGATCCCTTCGCCGCCAACAATACCCTGATCCCATCCTTTGATCACCTGGTGCAGAAGGATAATAGACACTTGTAACATACTTTGATCACCTAGCGTGAGCGCGTGACAGACAGACAGTGTACGCAGGGGCATGACATCGGTACCTCTCCGACGCCAACGCGGAAGGTGAGCGGCTTCCCGCGCTTGTAGCTGCTGTCGAACACCGTGCCGTCCTCCAGCCTCCCCGTGTAATGCGCCTGCACGCACCGAGCGATGCAGATGAGACGAGAGAGAGAGAGATCATCTTTAAGGACGACGACCGGTAGGTACAGACCCTGATGAGCTGTCCCTCCTGGGCGGCGGCGCCGGTGCCGACGACGCGGTCGCAGAAGGCGAGCCCGGACGGCGCCACCTCCAGCGGGCACTCCCCGCCGTCCGCGGCGGCCGCGGGGAGGGCGAAGCGGGAGAGAAAGGCGGTCGACAGCAGGGCGGCCGCTGCCTCGCGCCGCCGGAGGACGAGGCCGGGGCTCCTGGCCGCGGCGACGTCCGGGCGAGGCTGCGAAGGAGAGGAGGAGGAGGAGGAGGAGCGGGGGTGCTTCGCGGCGCCTGGCTTCGGGAGGCTGAGGAGGAGCCGGGACAGCGGCTGCGCGGAGGTGGACGCGCCCGGACCCATGGCTGCCTGATGGCGCGGAGGAGAGGCTGCCGTTGCCGTTGCTCCCGATAAGGCGACGCGGGTCGGCGCTTCTGAATTGTGGTGGACTGCTGGCGATTTCCGCGGTGAACTTGTGACGGAGATAGTTTGGGCCGTGCTAGAGAGAGAGAGAAAAGCCCAAGCCCGTCGCGTCGGTTCAGTGAGGCCCAGAGGGTGATCAACCGAACAGCAGTGTAACCCGAAGCAAATCTTGGCCCGCCAACATGGGTGCACTAGTCGAAATCTGCGTTGCGTGACGGGAACCATCGCCATAAAACACCGCGGCACGTGCCCCCGGGTTCGGCGGCCGGCGGCCTGCAGTGCGCTCCGAAAATCTCGCGTGGGCGGGCGGGCGACCGGGGTAATAAAAAGCGGGTAGGTTCCGGTCGATCTCACTTTCCTATCCGTCACGCAGGCCCGGGGCGCACTCTCCGCATGTGCGCTGCTGCCGTTGGCCGTTGCACGCCCCGAGCGGACCAGGTCACCGGCGACGAGGACGGCCACGTTTCCTCGCAAAGCCAAAGCCAGACACGCCAATCGCTCCTGTGATCGCGGTGGGGAACCACATGGACGCGTCACGGCATCAGTTACTCGGTTGACAGCAAAGGCAGAGTCGTACGGGGGGACGGTTAGGCCCAGCAAGCACGAGATTAAAAAATAATCTTTTTTTTTGTTTGCCGAAGTCAAGACTCAAAGTCTGAGAAACTGACTTGCTGGATCCCCCCCCCCCCCTCATCTGCTCGTGATGGGAGCAAATTCCTGTGTTCCACCACGCGCCATATGCAGGCGCCCGCAACCGCAACTAGAAATTGCGAACTTGTCGAGGTAACAGTCACAGTAAGGGCCTGTTTGTTTACCCCTATGGATTATATAATCTGGATTATTTTTGGAGGATTATATAATCTGGATTATATAATCTGAATTATATAATCTGAGTAGTCCTGTTTGTTTACCCAGATTATTTGAGTTGTTAATAGGATTCTTTTGTATGAGGAAGACAAGAATGCCCTCTACATTTGTACTAGGTTGAAACTCATATATGAAAAAAAATAATTCAATTGACATTGGCAAATATTGCATTAACAATATTATCACGGAAGGCATTATGTCACCTTCTTCATCCCCAAATTGACTAGTACTAGGCACAAAAACGATTCGGTGGATTATAATGGCAATGGTGGGTAATTTCTAGGAAACTTGAAAGGGTAGTGGAGAAGTGAGAAAAAAATAATCTGAAATAAGCACCTCCTCACTTGCTTATGGATTATCATAATCCAAGGGGTTAGATTATATAATCTGGGCAAATAAGCTGGACTGTTTGTTTGCCACTTAGGATTATTTAATCCAGATTATATAATCTGGAGGGTAAACAAACAGTCCCTAAGTCGTAACATTATCGGTACATGGAGTCGTTGACCTGCTCAGCCATTCTCCAACCCAACCCCACGAAGCCAGACGTGCAACAAGCCCATTCCACTCCACCACGTCACTCAACACCATGGTGGTCCGTCCGTGGCGCCGCCGCCCGCCACCCAGCAAAGTGAAGCAGGCGGTCAAAAACAGAGCACAATCAGTGGAGCGTGACTTGGAGGAGCCGAACGAAGACCCAGCGCAGTGCTCGTGCTCGGCGGCGTTTGACCGGCGCGCCCGTCGTCTCTGTCCGACGCTAACAGCCACTTTAAATCCTTCCGTCCGGCGGCGAGCCTGTGGTGCTCTATAGCTGGGAATAGGGTATGCAGTCGCGTGTGCACGTTCGGCGAAGGGTAGGAGGCGGAGGTTGTGACCTGTCAGCGGCACGGCCACGGGGGTTTTATGGCGCCGTTTAATCTGACAGCGCCTCGATCGTACTACGGTGTACCCGTATACGTGCGCGTCGGGCTGGCGACGTCTTAATTTATTATTTAGCAGAGATAACCAGGGTGCCCTTCACACTTGCACGCACGCACCTGGGTTCTGCTAAAAACTGAGTTGAATGCCATAACACATGACAGGCACGCACTCTCGTTGGTTCTCGTCTCGTACAGGCAGGCAGTACCTAGGACAGACTGACAGAGCCACGGATGTGACACGTTCTGGAGGCGGCCGCGCTGGCGCGGAACCTGGAGAAGTGGATCCTGTGCTCGGCTCTGCCGCCCCACCGGCCCACCGGCGATGGAGTGAGCTGCCAAGCGTGCGTGAGCCGCGGCAGCTTTGCTTTGCTAGCGCCAGCAACGGAATCGGCGGGAGAGGACTAGAGGAAAGGGTTCGGTCCACCTGCTCCCGGCCGCAACGCACACGCACTCTGCACTGCAGGTTGCGCACGCTTGCACTTGGATAAGGTCTGGTGCAAATGGTGGTGCAGTAGTTCGAGCGTAGATTAAGTGGACCGCGCTCCTAATCCATGTTACCTATACCTCCCCGCGGATCAGTAGTGCACAGCGTCACAGCGCAGTGGACAGTCGCACGGTCTCAGAAGGTAGCTTGGTGTCGCGTTCCCCGCGCACGTAAAAAGAGAACCACAAAAGTGCTGTTGGAGTTAAGCACCACCGCTGCAGCTGCAGCCGCAAGTGCAGGCAGGAGTGGAAGGCGTGGAGTGGCGTCGGCCTGCGGTCCGCGTCTGCGGGAGTGCTTGCGCGCCGGGTTTTGTGCCAAGCCCCCCTCTTCTCTCTCGGCGCTTTTCTTGGTGGGAAACTTGTGCCGACCCGCTAACATCACACTCTACTACGCACTCCCATCGTGGACATGGGAGTCGTGTTCCTTCTTCACAAAGACGACTGTCGAGTGTCGACGACTGCTCCTCCGATCACGTCCGTTGTTCACTGTCATGTACGACTGCTTCTCACTAGTAAGTTTACTGGCACTGGCAGGCAAGGCAGCAAAACATCGGCAGGACGGCAGCCGGAGGCGTTCGTTCGTTCGAGCGTGGCCAGCAATTTGGAACCTGGGAGCCAGGGCACCGTGGGTGCAGTGCAGTAAATGAGGTGTTGCAATGGCGATTTATCGGGGGGTGGTGGTGGAGTGAATGGATCCACGAGTTTACGTTGGTGCTCAGTGCTGCTCTGCCAGCCAACGTCGGATCGTATTGATGCGTGCTTTTCCCTGGCTGTGAGGCCCCGCCGCCGTACCCCGTCCGTGCGTCATAGGATACGCGCGCAGGCAGGGGCAGCTTCGTGTCTGTGTCTGTGTCTGTCCAACGTGTTGTTGGCCGTGGATGAGGACGAGATGAGTAAACGCCCGCCGGCCATTCCATTCCATTCCGTTCCATGTGCTTTGGAGTGTGGGATTTCAACTTCCCGCAAGAGTGTCAGCGGCCCATACGTACGTAACTGTCCCTGTTCACTTGGCCCTAGCACTAGGCCACTAGCACTGCGGTTCCTGGTGGCGCAGTCACTGTGATGTGAGCCCCACAACCACAGTTTCTTTCTTTTCTCAACGTTTTTGGCCACCACACTGCTAGTATCTCTCTTTTTTTTGTCTGGCGTCCTCATTTCAAATTACAAAATGGCAGATACCGAAACACTACTGCTAAACGCACTTTAGGAGTGAATTTGTATCTCCTGCCAAAAAAAAAAAAGCTTAGCCCATGTTTGGAACCACGCAAGTTTTTTTTTTGTGAAAATAATAATTAGATGGACGTGTTTGGAACTCGATTTCTAAGAAACCAGTTTCTAATTTTTTTCACACATGATTATTAGCATACCCTTCCTATGTTTAAAAACGAAAGCAATAGATATAGATTTCATAAAACCTACAAGGACATGATGTCATTAAACAAACAAAAACTGGTATATCAGCTAGATGAGAGTAGCTTCTTTATTTTTAAGAAACCGAAAATACAATTTTAATAAACTAGGAAATTAGCTGATATATTTGAAACCACCATGGCTTCTGTAAAACCAGTTTCTTTAGAAACTGTATGCTGTCCGACAGACCCATATACTGTTTTCAGTCACGTCCTCTATATATATCTATTCTCTATATCTGCTCTTTACAGCCTCCTCTAAAAGATTTCATCCTCTATATCTTTTTCATCTCCAACAACGTCCTCTATACGCAAATACCTATATTAGAGTCATTTTTTATTTTTTATTTTTTGTACATACGTACTTGTCATGCTCTCAAATGCATTGGACATATTTTAGTTTTGCTAAATCGATTGTATAAAGTGTTCAAATGGATAGAAGAAATAAGGGAGAAACTGTATATATAAAGGATCTGTACTATAAATTTAAAAGGACCGTTTGAATGACGCTGCTGGAGTGAGTATAGGACAGAAATCTTCTCTACAATTAGAGTAGAGAGTGTTGAAGCCGGTCTTAATAGATCATCCGTATATTTCTACCTTCGTATTGAATTCTCTGCAATGGTACGTGTCTTGAACCTTTTAATGAGTGCCGATGTTGCTAGAGTATCTTTTTGGGAAGAAAGGATAGCAGGCTTTTTCAACTCAACCTTAAATGCCGCTACGTTTCGAAGGAAAGCGTGATCCATAATAAAGATTGTAGACCAGCATGCTACCATCCATACTCCGAGCCCTGTTTTGCAAAACTGAGGAGAAAAAACAATAGGGCATTCGAGTTTGTAGTACCATTACCATCCTTTGACCCTTAGACTATCTCTAGCAGATATCTTATATCAAACTTTATTCTACAAATAATATTAAACATTGTAATCTACGGTTCTGTGTACCTATTTTACATTATTCGTTGGAGTAGACTGTCTTCGGTGGATC