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BaseInfo

ncRNA ID novel_gma_miR1368
Species Glycine max
Class miRNA
Genome position Chr1:27131843-27131933 [+]
Reference genome Glycine_max_v2.0
Source SRR1451644
Length 21
Mature sequence(if miRNA) 1 - ACUUGUGGAUGAUAAUGACUU - 21
Stem-loop(if miRNA) --       -GA        A     AC     G    UG  A  AU
  ACUUGUG   UGAUAAUG CUUCC  UCGAG GUGA  CU UU  G
  |||||||   |||||||| |||||  ||||| ||||  || ||
  UGAACAU   GUUGUUAU GAAGG  AGUUC CACU  GA AA  U
UG       GAG        A     --     A    CA  G  AG
Stem-loop sequence ACUUGUGGAUGAUAAUGACUUCCACUCGAGGGUGAUGCUAUUAUGUGAAAGAGACUCACACUUGAGGAAGAUAUUGUUGGAGUACAAGUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003542881.3
ncRNA:21   UUCAGUAAUAGUAGGUGUUCA   1
  **||||||||||||*||||||
targets:268   CUGUCAUUAUCAUCAACAAGU   288

1.5 PREDICTED: Glycine max UDP-galactose transporter 1 (LOC100786532), mRNA UDP-galactose transporter 1(LOC100786532) coding protein psRNATarget
XM_003544637.3
ncRNA:21   UUCAGUAAUAGUAGGUGUUCA   1
  **||||||||||||*||||||
targets:441   CUGUCAUUAUCAUCAACAAGU   461

1.5 PREDICTED: Glycine max UDP-galactose transporter 1-like (LOC100817042), mRNA UDP-galactose transporter 1-like(LOC100817042) coding protein psRNATarget