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BaseInfo

ncRNA ID novel_gma_miR1366
Species Glycine max
Class miRNA
Genome position Chr12:741643-741773 [+]
Reference genome Glycine_max_v2.0
Source SRR1451644;SRR1294479;SRR1294482;SRR1294483;SRR835765;SRR835766;SRR835771;SRR1295522;SRR1292926;SRR1451611;SRR1451613;SRR1451616;SRR1451619;SRR1451620;SRR1451621;SRR1451623
Length 21
Mature sequence(if miRNA) 111 - UUGGGUGGGGGUGGGGUACAG - 131
Stem-loop(if miRNA) --U     UG    -     --UCUCAUAUU     --UGA      CC       CU   U  CAUUG
   UGCCU  UUUU ACCCA           CUGUU     UGAGUU  AGUACUG  UGA UG     A
   |||||  |||| |||||           |||||     ||||||  |||||||  ||| ||
   AUGGG  GGGG UGGGU           GGUAG     ACUCGG  UCAUGAU  AUU AC     C
GAC     GU    G     UUUUCCUUUUU     UAGUG      UU       --   U  AUUUC
Stem-loop sequence UUGCCUUGUUUUACCCAUCUCAUAUUCUGUUUGAUGAGUUCCAGUACUGCUUGAUUGCAUUGACCUUUACAUUUAUAGUACUUUGGCUCAGUGAUGAUGGUUUUUCCUUUUUGGGUGGGGGUGGGGUACAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK244410.1
ncRNA:21   GACAUGGGGUGGGGGUGGGUU   1
  ||*||||=||||||||||||*
targets:20   CUAUACCUCACCCCCACCCAC   40

3.0 Glycine max cDNA, clone: GMFL01-02-O24 NA coding protein psRNATarget