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BaseInfo

ncRNA ID novel_gma_miR1359
Species Glycine max
Class miRNA
Genome position Chr8:40985101-40985205 [+]
Reference genome Glycine_max_v2.0
Source SRR1294479
Length 21
Mature sequence(if miRNA) 1 - GAGAACAGUAUCAAAAGCAAC - 21
Stem-loop(if miRNA) --                   A   C    C GG       -    GUC    U
  GAGAACAGUAUCAAAAGCA CUA GGAA U  AUCUAAG UUUU   CCUA U
  ||||||||||||||||||| ||| |||| |  ||||||| ||||   ||||
  CUCUUGUUAUGGUUUUCGU GAU CCUU A  UAGAUUC GAAA   GGAU U
AC                   G   U    C AG       U    --A    U
Stem-loop sequence GAGAACAGUAUCAAAAGCAACUACGGAACUGGAUCUAAGUUUUGUCCCUAUUUUUAGGAAAAGUCUUAGAUGAACUUCCUUAGGUGCUUUUGGUAUUGUUCUCCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003552196.3
ncRNA:21   CAACGAAAACUAUGACAAGAG   1
  |*||||||||||*|||||||*
targets:1807   GCUGCUUUUGAUCCUGUUCUA   1827

2.5 PREDICTED: Glycine max vacuolar cation/proton exchanger 3 (LOC100816231), mRNA vacuolar cation/proton exchanger 3(LOC100816231) coding protein psRNATarget
AK286779.1
ncRNA:21   CAACGAAAACUAUGACAAGAG   1
  |*||||||||||*|||||||*
targets:1808   GCUGCUUUUGAUCCUGUUCUA   1828

2.5 Glycine max cDNA, clone: GMFL01-36-I18 NA coding protein psRNATarget