ncRNA ID | novel_gma_miR1359 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr8:40985101-40985205 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294479 |
Length | 21 |
Mature sequence(if miRNA) | 1 - GAGAACAGUAUCAAAAGCAAC - 21 |
Stem-loop(if miRNA) |
--                   A   C    C GG       -    GUC    U   GAGAACAGUAUCAAAAGCA CUA GGAA U  AUCUAAG UUUU   CCUA U   ||||||||||||||||||| ||| |||| |  ||||||| ||||   ||||   CUCUUGUUAUGGUUUUCGU GAU CCUU A  UAGAUUC GAAA   GGAU U AC                   G   U    C AG       U    --A    U |
Stem-loop sequence | GAGAACAGUAUCAAAAGCAACUACGGAACUGGAUCUAAGUUUUGUCCCUAUUUUUAGGAAAAGUCUUAGAUGAACUUCCUUAGGUGCUUUUGGUAUUGUUCUCCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003552196.3 |
|
2.5 | PREDICTED: Glycine max vacuolar cation/proton exchanger 3 (LOC100816231), mRNA | vacuolar cation/proton exchanger 3(LOC100816231) | coding protein | psRNATarget | |||||||||
AK286779.1 |
|
2.5 | Glycine max cDNA, clone: GMFL01-36-I18 | NA | coding protein | psRNATarget |