Search result

BaseInfo

ncRNA ID	zma_circ_000330
Species	Zea mays
Class	circRNA
Genome position	6:29352629-29355461[-]
Reference genome	AGPv3.22
Source	PlantcircBase
Method	SMALT and Segemehl
Type	intronic
Splice junction sequence	CTTTTTGTTTTCGGCGATGACACCAAGCACGAACGCCAGAACCCCAAAGAACGCGACGCTAAGAGAAATCCGTAGCGTCGCAGACAGAGCCATCGCTCCTCAAGTGCCACAATGGACAGGCTCCCCATCGCAAGAGTCGGATCACTTGGAAACGTGCAGATGACGACATCCTTTCCTAGGATAGGAGTCCCGGAAGCAGG
Tissues	shoot
Exon boundary	No-No
Splicing signals	AC-CT
circRNA sequence	NA
Genomic sequence	CTTTTTGTTTTCGGCGATGACACCAAGCACGAACGCCAGAACCCCAAAGAACGCGACGCTAAGAGAAATCCGTAGCGTCGCAGACAGAGCCATCGCTCCTGCAGGACAAGCAACCCACGCACTGGGATCAACAAACCCATTGCTTAAGTAATGGAATGCAGACAAGACATCACGACAGCGTGCCAGCGACGACGTATTGGAAACTCCTCCCCCCACAAGATATCGGGTGGTTTCAGATGAAACGAGTGGTCTGTTTATTTTAGGATTAATTGTACTTAACCCTTTATTTTACGGTGAGGTGACTGGCAGGTCTCTGTCCTATCGTCCCTATCGACCGACTGCGGCACTCACAAGGGGAGAAGTTTATGAAATCGACAAGTTCCTCGTATTGGTTTCCTCTACACACGGGATTACAGGAAGGCATACAGTATCCTGTATCGCCTTTCAGAACGGTGGTTGAGCCCAGGAATTAGATGGGGGGATGCAACCGACAGGTCGATTCGATCTACTAATTAGCTCCCAGGCTCCCAGCAATAAGTAGTCAACTTTCAACTGCAATAGTGAAAAGTAACTTCCGGATGAACCATCGTCATCAGGTCATGACGCATTGACCTCACAGGACAAGCACATGCAGATTCAGTTTCCTTTTCCAACCTAGTTAGGTACCAGGGGAAAGGGGAATCCACAGGGCCGGCCGCATGGAGGTTGGAGGGCTCAGTCCAGTTGAGTTGAGTCTCCCACAATTGAGGACGCAGCTGCTCCTCCAACCAAACGAATTCGCAACTGACCGTGCGGACTGGAGCAATAGGAGAATCGAAGATTTGAAAATTTGGACCTGGCCGATTGCAAGAAAAATCCTAGGGGAAGAAGCGAAAACGCGGAAGACACCGGCAGACCGTCTCGGTAGGCGGCTAGGTAGGTTAGCATACCTTGAGGTTGGTAGGCGCCGCCGCTAGGGAAGGTCCGATCGGTGGCCTCACCTCGCTGCCGGAGGCGAGGGAGCGGCGGAACGAGGAAGATTGATCGGGCGGGGTTGCAGATGCAAAGCCACGGACGCACGGCCAATATGGTTAGTTACTTATTATACCCATTTTTTTCGTTTTGTATTTATTGTGTACAAGTTGCTATCGTGTGGCTATTTTCGACATTTCCAAGGTGAGGGGAGAGATGGCAGGATAGATTGATCATGATCCAACCGTAGATATAATCTTAGTTTGTTATGTGGTTTCTATAAATCTCTACTAATCCTTAAGGGTGGACGGAGGGCGTCCACCACCGCACCGTGCCCCGCCCGCGATTTTGGGCCCCCACGCGCGTCTTCCTCCCGCCCACGAATCAAGCCCCGCGCGCGTCGCCCTCGCCGCCGGGTAATCCCGCTCGCGCCAGGCACCCCGCCCCCCTCCCCTGCGCGCCGTGATGCCCACTGTCGGGTAAGTGAACCGCGCAAGCCACCCCGCAACGCCCGCATGCCTTCACCACGCCTCCGCCCGCCCTCGCCCTCCCATCTGCGACCTCCGCCAGTTTCTTCTCGCCCGCGCCCCCCTGCGAGGTCGTGCCCCTGGCCGAGCGCCCCCCTTGACGTTCCCCTCTCCCCGCAGCCCACGCCCACGCCGCCAACGCCGCTCAACTAGCTTTCGCGCTCCCCTGGCGTGCAACAGCTTTCGCGCTCCCCCTGCCCCCGCCATGCCCGCACTAGATCTGCAAAACATCCGTCGCTGGCACACTCCTCAGGTGCGGCGGCTGCACCTGCACAGCCGGTTCGTCACCAAGCTCGGGGGGAGTGGCTCGTGGCAGTCGCCTCAACGTCGTCCTCCGTGTCATCTGGCGAGGTGTCGTCACCCCAGATCTATAACGCCCTGAATTTGGGGGTAGAATTTTTTCTTCTTTTCCCTCACCAAATTCGGGCGTTACCCTTTCCTTTTCCCTTTTCTCCTCGCTAAACCTTGATCTTTTCCAAAGTTATAGCGGGATTCGGCCTGAGATCCCATGTAAAGCGAAACCCTAAAATACTTTATTTTGTGTGATGCACCATGCCGAACCATGCATACTTTTTGATTGTTTAAAATGTAAATGCATTCATCTAGAGAAAATAGATTTTTAGAAAAAGGAAAACTTCTTTCTTCTCCCTTTCCCCCCTCCTTCCCCATTTTTGGCCCAGCCGCCCTCTCCCCCTTGCACCCGGCCCAGCCGGCCGGCCCAGCCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAATCATGAGGCAAGATTTAAGTGTGATTATTAACGCCGATTAACATGATAAATATAGTTAGTTCTCTGTGATCTTCTAGAGGGGAAATTCTAAATATTAGCATTACAGAACAAATTAAAAGATTCCAGGTCCAGGAAAGAGAACAATTCTGGAGTGCAAAACTTAGATGGGTCAGATTGCAGCTCAGTATCCCAAATGATAGAAGGGCCAGACAAGTGAACCACACAAAAGAAAACATAAGAACACAGGGCATATTGTTTCCAGAGCACATGGGACTCTGAAAAGTCATATAGCTGAAAGGATACTCACTCAGCAACAACAAAGAACACTGTCAAGCTGGTGCTTTGAAACAGCGCTCCACGAGGAACTGACTTGCCCGAGTATGGAAAGAAGATGGCAACATGGCCTACGATGGCAGCTACCACAAGTGCCACAATGGACAGGCTCCCCATCGCAAGAGTCGGATCACTTGGAAACGTGCAGATGACGACATCCTTTCCTAGGATAGGAGTCCCGGAAGCAGG