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BaseInfo

ncRNA ID novel_gma_miR1346
Species Glycine max
Class miRNA
Genome position Chr1:2230851-2230927 [-]
Reference genome Glycine_max_v2.0
Source SRR1292924;SRR1451648;SRR1753108;SRR1295516;SRR1295518;SRR1295521;SRR1451604;SRR1451608;SRR1451612;SRR1451614;SRR1451616;SRR1451617;SRR1451619;SRR1451620;SRR1451622
Length 24
Mature sequence(if miRNA) 1 - GUGAGGAUGAAAGAAAAUGAAUGC - 24
Stem-loop(if miRNA) --   G A               A       U    AAA
  AUU A UUUUUUUUAUUUUUA AAUUUUG AUUU   U
  ||| | ||||||||||||||| ||||||| ||||
  UAA U AAAGAAAGUAGGAGU UUAAAAU UAAA   A
CG   G A               G       -    AAA
Stem-loop sequence AUUGAAUUUUUUUUAUUUUUAAAAUUUUGUAUUUAAAUAAAAAAAUUAAAAUUGUGAGGAUGAAAGAAAAUGAAUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003550403.3
ncRNA:24   CGUAAGUAAAAGAAAGUAGGAGUG   1
  ||--|||||||||||||||=|||*
targets:739   GC--UCAUUUUCUUUCAUCUUCAG   760

2.5 PREDICTED: Glycine max uncharacterized protein At1g76660-like (LOC100786787), mRNA uncharacterized protein At1g76660-like(LOC100786787) coding protein psRNATarget