Search result

BaseInfo

ncRNA ID novel_gma_miR1341
Species Glycine max
Class miRNA
Genome position Chr18:42736507-42736722 [+]
Reference genome Glycine_max_v2.0
Source SRR1451643;SRR2968978;SRR835772
Length 22
Mature sequence(if miRNA) 195 - AACAUAAGUCAGGGUAGACGCC - 216
Stem-loop(if miRNA) --                 C                   A                                       C                   -----C    C
  CGUCUACCCUGACUUAU UUCCUUCUUUGGAAGUGGC UCAUCCAAAUCUCUGUAGCCUGUAUCAAGUGAUCUGUUC UAGUCAGGUUCACAUCAUC      CGUC A
  ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||      |||| A
  GCAGAUGGGACUGAAUA AAGGGAGAAACCUUCACCG AGUAGGUUUAGAGACAUCGGACAUGGUUCGCUAGGCAAG AUCGGUCCAAGUGUAGUAG      GUAG C
CC                 C                   C                                       C                   ACCAUA    U
Stem-loop sequence CGUCUACCCUGACUUAUCUUCCUUCUUUGGAAGUGGCAUCAUCCAAAUCUCUGUAGCCUGUAUCAAGUGAUCUGUUCCUAGUCAGGUUCACAUCAUCCCGUCCAACUGAUGAUACCAGAUGAUGUGAACCUGGCUACGAACGGAUCGCUUGGUACAGGCUACAGAGAUUUGGAUGACGCCACUUCCAAAGAGGGAACAUAAGUCAGGGUAGACGCC