| ncRNA ID | novel_gma_miR1339 |
| Species | Glycine max |
| Class | miRNA |
| Genome position | Chr18:9574108-9574301 [-] |
| Reference genome | Glycine_max_v2.0 |
| Source | SRR1451643;SRR1451611 |
| Length | 21 |
| Mature sequence(if miRNA) | 1 - UCUCUUAUAAGUGUUUAUGGG - 21 |
| Stem-loop(if miRNA) |
-- G --- ---U C U G C UG CUUC --U AAGUUCUCCUAUUU CAUAAGCACU AUAAGAGAA GAAAAUAAGG AAAA A AUUGAGUUU UU CA GGUUAAAAU AACUU AUAG A |||||||||| ||||||||| |||||||||| |||| | ||||||||| || || ||||||||| ||||| |||| A GUAUUUGUGA UAUUCUCUU UUUUUAUUCU UUUU U UAAUUCAAA AA GU UCAAUUUUA UUGAA UGGA C GG A UUU UCUU A C G A GU ---A UGG GGUGAAAAGCCCUU |
| Stem-loop sequence | CAUAAGCACUGAUAAGAGAAGAAAAUAAGGUAAAACAUAUUGAGUUUGUUCCAUGGGUUAAAAUCUUCAACUUUAUAGAAGUUCUCCUAUUUAACUUCCCGAAAAGUGGAGGUGGUAAGUUAAUUUUAACUUGUGAAAGAAACUUAAUCUAUUUUUUCUUCUUAUUUUUUUUUUCUCUUAUAAGUGUUUAUGGG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK287036.1 |
|
2.5 | Glycine max cDNA, clone: GMFL01-42-J20 | NA | coding protein | psRNATarget | |||||||||
| XM_003517813.3 |
|
2.5 | PREDICTED: Glycine max protein BIG GRAIN 1-like E (LOC100798968), mRNA | protein BIG GRAIN 1-like E(LOC100798968) | coding protein | psRNATarget | |||||||||
| XM_003520081.3 |
|
2.5 | PREDICTED: Glycine max protein BIG GRAIN 1-like E (LOC100775233), mRNA | protein BIG GRAIN 1-like E(LOC100775233) | coding protein | psRNATarget |