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BaseInfo

ncRNA ID	novel_gma_miR1338
Species	Glycine max
Class	miRNA
Genome position	Chr17:8693903-8694001 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451643
Length	21
Mature sequence(if miRNA)	79 - AAACUUCAAUUCUGAUCAGAG - 99
Stem-loop(if miRNA)	--CCA                     CA      UA  UUAUA      GCA      AUCAGAAUUGGAGUUUUACCU  GUAAUC  CA     AAAUCU   U      |||||||||||||||||||||  ||||||  ||     ||||||      UAGUCUUAACUUCAAAAUGGA  CAUUAG  GU     UUUAGA   U GAGAC                     AC      GC  -----      AAA
Stem-loop sequence	CCAAUCAGAAUUGGAGUUUUACCUCAGUAAUCUACAUUAUAAAAUCUGCAUUAAAAGAUUUUGCGGAUUACCAAGGUAAAACUUCAAUUCUGAUCAGAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003526422.2	ncRNA:21   GAGACUAGUCUUAACUUCAAA   1   =||*||||||||||||||||| targets:582   UUCCGAUCAGAAUUGAAGUUU   602 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC100782996 (LOC100782996), mRNA	uncharacterized LOC100782996(LOC100782996)	coding protein	psRNATarget
BT095961.1	ncRNA:21   GAGACUAGUCUUAACUUCAAA   1   =||*||||||||||||||||| targets:551   UUCCGAUCAGAAUUGAAGUUU   571 Target Full Sequence	1.0	Soybean clone JCVI-FLGm-15G2 unknown mRNA	NA	coding protein	psRNATarget
XM_003522635.3	ncRNA:21   GAGACUAGUCUUAACUUCAAA   1   =||*||||||||||||||||| targets:638   UUCCGAUCAGAAUUGAAGUUU   658 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC100798503 (LOC100798503), mRNA	uncharacterized LOC100798503(LOC100798503)	coding protein	psRNATarget
XM_014778303.1	ncRNA:21   GAGACUAGUCUUAACUUCAAA   1   |||*|||=||||||||||||| targets:773   CUCCGAUUAGAAUUGAAGUUU   793 Target Full Sequence	2.0	PREDICTED: Glycine max serine-threonine kinase (LOC100305392), transcript variant X1, mRNA	serine-threonine kinase(LOC100305392)	coding protein	psRNATarget
XM_006588203.2	ncRNA:21   GAGACUAGUCUUAACUUCAAA   1   =||**|||||||||||||||| targets:253   UUCCAAUCAGAAUUGAAGUUU   273 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized sugar kinase slr0537-like (LOC100792076), mRNA	uncharacterized sugar kinase slr0537-like(LOC100792076)	coding protein	psRNATarget
BT093223.1	ncRNA:21   GAGACUAGUCUUAACUUCAAA   1   =||||||=|||||||=||||| targets:808   UUCUGAUUAGAAUUGGAGUUU   828 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-14A13 unknown mRNA	NA	coding protein	psRNATarget
NM_001317476.2	ncRNA:21   GAGACUAGUCUUAACUUCAAA   1   =||||||=|||||||=||||| targets:887   UUCUGAUUAGAAUUGGAGUUU   907 Target Full Sequence	2.5	Glycine max uncharacterized LOC100800312 (LOC100800312), mRNA	uncharacterized LOC100800312(LOC100800312)	coding protein	psRNATarget
XM_006602543.2	ncRNA:21   GAGACUAGUCUUAACUUCAAA   1   ||||*||||||||||=||||| targets:2206   CUCUAAUCAGAAUUGGAGUUU   2226 Target Full Sequence	2.5	PREDICTED: Glycine max BAG family molecular chaperone regulator 6-like (LOC100785407), mRNA	BAG family molecular chaperone regulator 6-like(LOC100785407)	coding protein	psRNATarget
XM_006594310.2	ncRNA:21   GAGACUAGUCUUAACUUCAAA   1   |||*|||||||||||*||||| targets:215   CUCCGAUCAGAAUUGCAGUUU   235 Target Full Sequence	2.5	PREDICTED: Glycine max protein argonaute 6 (LOC100778875), transcript variant X5, mRNA	protein argonaute 6(LOC100778875)	coding protein	psRNATarget
XM_003521825.3	ncRNA:21   GAGACUAGUCUUAACUUCAAA   1   =|||*|||||||||*|||||| targets:1947   UUCUCAUCAGAAUUCAAGUUU   1967 Target Full Sequence	2.5	PREDICTED: Glycine max probable arabinosyltransferase ARAD1 (LOC100819640), mRNA	probable arabinosyltransferase ARAD1(LOC100819640)	coding protein	psRNATarget
AK285528.1	ncRNA:21   GAGACUAGUCUUAACUUCAAA   1   =|||*||||*||||||||||| targets:1928   UUCUAAUCAAAAUUGAAGUUU   1948 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-10-P20	NA	coding protein	psRNATarget
XM_003524477.3	ncRNA:21   GAGACUAGUCUUAACUUCAAA   1   =|||*||||*||||||||||| targets:1938   UUCUAAUCAAAAUUGAAGUUU   1958 Target Full Sequence	2.5	PREDICTED: Glycine max 3-ketoacyl-CoA synthase 11-like (LOC100817884), mRNA	3-ketoacyl-CoA synthase 11-like(LOC100817884)	coding protein	psRNATarget