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BaseInfo

ncRNA ID novel_gma_miR1336
Species Glycine max
Class miRNA
Genome position Chr16:9016217-9016309 [+]
Reference genome Glycine_max_v2.0
Source SRR1451643
Length 23
Mature sequence(if miRNA) 71 - AGACUUACGAAUCAACUUGAUCC - 93
Stem-loop(if miRNA) --     CC    C     A                      CAUA
  AUCAA  UGAU CGUAA UCUGUUAUGGAUCAACUUGAUC    A
  |||||  |||| ||||| ||||||||||||||||||||||    G
  UAGUU  ACUA GCAUU AGACAAUGCCUAGUUGAACUAG    U
CC     CA    A     C                      ACAU
Stem-loop sequence AUCAACCUGAUCCGUAAAUCUGUUAUGGAUCAACUUGAUCCAUAAGUUACAGAUCAAGUUGAUCCGUAACAGACUUACGAAUCAACUUGAUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003547498.3
ncRNA:23   CCUAGUUCAACUAAGCAUUCAGA   1
  |||||||*|||||*|||||||||
targets:460   GGAUCAACUUGAUCCGUAAGUCU   482

2.5 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_014768353.1
ncRNA:23   CCUAGUUCAACUAAGCAUUCAGA   1
  |||||||*|||||*|||||||||
targets:1055   GGAUCAACUUGAUCCGUAAGUCU   1077

2.5 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget