ncRNA ID | novel_gma_miR1336 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr16:9016217-9016309 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451643 |
Length | 23 |
Mature sequence(if miRNA) | 71 - AGACUUACGAAUCAACUUGAUCC - 93 |
Stem-loop(if miRNA) |
--     CC    C     A                      CAUA   AUCAA  UGAU CGUAA UCUGUUAUGGAUCAACUUGAUC    A   |||||  |||| ||||| ||||||||||||||||||||||    G   UAGUU  ACUA GCAUU AGACAAUGCCUAGUUGAACUAG    U CC     CA    A     C                      ACAU |
Stem-loop sequence | AUCAACCUGAUCCGUAAAUCUGUUAUGGAUCAACUUGAUCCAUAAGUUACAGAUCAAGUUGAUCCGUAACAGACUUACGAAUCAACUUGAUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003547498.3 |
|
2.5 | PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA | CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) | coding protein | psRNATarget | |||||||||
XM_014768353.1 |
|
2.5 | PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA | CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) | coding protein | psRNATarget |