ncRNA ID | novel_gma_miR1334 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr7:34470215-34470344 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294479 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UGCCCUGAUAAUAUCGAUUUUGAC - 24 |
Stem-loop(if miRNA) |
--      G         A      -  GA   C     CAU   AA   --U          U  G   UGCCCU AUAAUAUCG UUUUGA CU  AAC GAUGU   AAG  CAU   CAACAUCGGU UU U   |||||| ||||||||| |||||| ||  ||| |||||   |||  |||   |||||||||| ||   ACGGGA UAUUGUAGC AAAAUU GG  UUG CUACA   UUC  GUA   GUUGUAGCCA AA C UC      A         C      C  -A   A     UCU   AC   UAU          C  A |
Stem-loop sequence | UGCCCUGAUAAUAUCGAUUUUGACUGAAACCGAUGUCAUAAGAACAUUCAACAUCGGUUUUGUCAAACACCGAUGUUGUAUAUGCACUUUCUACAUCAGUUAGGCUUAAAACCGAUGUUAUAAGGGCACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006588858.2 |
|
3.0 | PREDICTED: Glycine max DNA-directed RNA polymerase I subunit 1-like (LOC100779532), mRNA | DNA-directed RNA polymerase I subunit 1-like(LOC100779532) | coding protein | psRNATarget |