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BaseInfo

ncRNA ID	novel_gma_miR1333
Species	Glycine max
Class	miRNA
Genome position	Chr15:14166046-14166195 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451643
Length	22
Mature sequence(if miRNA)	129 - UUUCGCUUUCUUCUUCUCCUGU - 150
Stem-loop(if miRNA)	-ACCA     C             C         U                CACU        C    UU    A      AGAGG AGAAAGUGGAGUG AGCCAAGGG GAUUUGCCGGCACAGG    AAUUAGUU AAUA  GAAU G      ||||| ||||||||||||| ||||||||| ||||||||||||||||    |||||||| ||||  |||| U      UCUUC UCUUUCGCUUUAC UCGGUUCUC UUGAACGGCCGUGUCU    UUAGUUAG UUGU  CUUG U UGUCC     U             A         U                UCAU        U    --    A
Stem-loop sequence	ACCAAGAGGCAGAAAGUGGAGUGCAGCCAAGGGUGAUUUGCCGGCACAGGCACUAAUUAGUUCAAUAUUGAAUAGUUAGUUCUGUUUGAUUGAUUUACUUCUGUGCCGGCAAGUUUCUCUUGGCUACAUUUCGCUUUCUUCUUCUCCUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003556584.3	ncRNA:22   UGUCCUCUUCUUCUUUCGCUUU   1   |*|||||||||||||||=|||| targets:330   AGAGGAGAAGAAGAAAGUGAAA   351 Target Full Sequence	1.5	PREDICTED: Glycine max flavonol synthase/flavanone 3-hydroxylase-like (LOC100806672), mRNA	flavonol synthase/flavanone 3-hydroxylase-like(LOC100806672)	coding protein	psRNATarget
XM_003541325.3	ncRNA:22   UGUCCUCUUCUUCUUUCGCUUU   1   **||||||||||||||||*||| targets:3422   UAAGGAGAAGAAGAAAGCAAAA   3443 Target Full Sequence	1.5	PREDICTED: Glycine max ABC transporter C family member 5-like (LOC100781010), mRNA	ABC transporter C family member 5-like(LOC100781010)	coding protein	psRNATarget
XM_003533378.3	ncRNA:22   UGUCCUCUUCUUCUUUCGCUUU   1   *=||*||=|||||||||||||| targets:66   UUAGCAGGAGAAGAAAGCGAAA   87 Target Full Sequence	2.0	PREDICTED: Glycine max probable mannitol dehydrogenase (LOC100801089), mRNA	probable mannitol dehydrogenase(LOC100801089)	coding protein	psRNATarget
XM_006581587.2	ncRNA:22   UGUCCUCUUCUUCUUUCGCUUU   1   ==|||||=|||||||||*|||| targets:427   GUAGGAGGAGAAGAAAGGGAAA   448 Target Full Sequence	2.5	PREDICTED: Glycine max myosin-11-like (LOC100815082), transcript variant X1, mRNA	myosin-11-like(LOC100815082)	coding protein	psRNATarget
XM_006579101.1	ncRNA:22   UGUCCUCUUCUUCUUUCGCUUU   1   ==**||||||=||||||||||| targets:657   GUUUGAGAAGGAGAAAGCGAAA   678 Target Full Sequence	2.5	PREDICTED: Glycine max myb-like protein D (LOC102667127), mRNA	myb-like protein D(LOC102667127)	coding protein	psRNATarget