Search result

BaseInfo

ncRNA ID novel_gma_miR1332
Species Glycine max
Class miRNA
Genome position Chr1:29527468-29527585 [+]
Reference genome Glycine_max_v2.0
Source SRR1294479
Length 24
Mature sequence(if miRNA) 95 - UGAGCUGGUAGAGGAGGAAGAACC - 118
Stem-loop(if miRNA) --         G                     C     A          -         
  UUCUUCCUC UCUACCAGCUCAAUAUCUUUC UUUCA CUUUUGUUUU GUAAAUUACA
  ||||||||| ||||||||||||||||||||| ||||| |||||||||| |||||||||G
  AAGAAGGAG AGAUGGUCGAGUUAUAGAAAG AAAGU GGAAACGAAA CAUUUGAUGU
CC         G                     -     -          A         
Stem-loop sequence UUCUUCCUCGUCUACCAGCUCAAUAUCUUUCCUUUCAACUUUUGUUUUGUAAAUUACAGUGUAGUUUACAAAAGCAAAGGUGAAAGAAAGAUAUUGAGCUGGUAGAGGAGGAAGAACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003547543.3
ncRNA:24   CCAAGAAGGAGGAGAUGGUCGAGU   1
  |*||||||=|||||||||||*|||
targets:451   GAUUCUUCUUCCUCUACCAGAUCA   474

2.5 PREDICTED: Glycine max NAC transcription factor 56 (LOC100170712), mRNA NAC transcription factor 56(LOC100170712) coding protein psRNATarget