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BaseInfo

ncRNA ID novel_gma_miR1331
Species Glycine max
Class miRNA
Genome position Chr1:53613876-53613945 [+]
Reference genome Glycine_max_v2.0
Source SRR1451643
Length 24
Mature sequence(if miRNA) 47 - AUCCGUCGGGUAUCGGGUAUCCCC - 70
Stem-loop(if miRNA) --CC                    U  A UU AUU
    AUACCCGAUACCCGACGGGU UG G  U   G
    |||||||||||||||||||| || |  |
    UAUGGGCUAUGGGCUGCCUA GC C  A   U
CCCC                    U  C CU CCC
Stem-loop sequence CCAUACCCGAUACCCGACGGGUUUGAGUUUAUUGUCCCAUCCCCGUAUCCGUCGGGUAUCGGGUAUCCCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006598258.1
ncRNA:24   CCCCUAUGGGCUAUGGGCUGCCUA   1
  ||*|||||||||||||||||||=|
targets:558   GGAGAUACCCGAUACCCGACGGGU   581

1.5 PREDICTED: Glycine max polygalacturonase inhibitor 2-like (LOC102660019), mRNA polygalacturonase inhibitor 2-like(LOC102660019) coding protein psRNATarget