Search result

BaseInfo

ncRNA ID novel_gma_miR1327
Species Glycine max
Class miRNA
Genome position Chr13:42628136-42628183 [+]
Reference genome Glycine_max_v2.0
Source SRR1451643
Length 22
Mature sequence(if miRNA) 27 - CUUCCGGAUGAACAAUUUGUUC - 48
Stem-loop(if miRNA) --    U             C  A
  ACAA UUGUUCAUCCGGA GA G
  |||| ||||||||||||| ||
  UGUU AACAAGUAGGCCU CU G
CU    U             U  U
Stem-loop sequence ACAAUUUGUUCAUCCGGACGAAGGUUCUUCCGGAUGAACAAUUUGUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006588641.2
ncRNA:22   CUUGUUUAACAAGUAGGCCUUC   1
  |||*||*||||||||||||||*
targets:162   GAAGAACUUGUUCAUCCGGAAA   183

3.0 PREDICTED: Glycine max uncharacterized LOC102667717 (LOC102667717), transcript variant X1, mRNA uncharacterized LOC102667717(LOC102667717) coding protein psRNATarget
XM_006588642.2
ncRNA:22   CUUGUUUAACAAGUAGGCCUUC   1
  |||*||*||||||||||||||*
targets:173   GAAGAACUUGUUCAUCCGGAAA   194

3.0 PREDICTED: Glycine max uncharacterized LOC102667717 (LOC102667717), transcript variant X2, mRNA uncharacterized LOC102667717(LOC102667717) coding protein psRNATarget