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BaseInfo

ncRNA ID novel_gma_miR1326
Species Glycine max
Class miRNA
Genome position Chr11:6365381-6365526 [-]
Reference genome Glycine_max_v2.0
Source SRR1451642
Length 21
Mature sequence(if miRNA) 1 - UAUAAGUGCUUAUGGAGAAGU - 21
Stem-loop(if miRNA) --      U     UG     --   AAAAUUUAUCCAAACCUGCCCAUUAUUAUGAGAGUUUUUACAAAUUAG
  UUCUCC AUAAG  CUUAU  GGA                                                C
  |||||| |||||  |||||  |||                                                C
  AAGAGG UAUUC  GAAUA  CUC                                                U
UG      -     GU     UC   UCCUUUUUAAUUUGUUCGAGGUGGUCUUCGAUUUUCAUCGAAUACGUA
Stem-loop sequence UUCUCCUAUAAGUGCUUAUGGAAAAAUUUAUCCAAACCUGCCCAUUAUUAUGAGAGUUUUUACAAAUUAGCCUAUGCAUAAGCUACUUUUAGCUUCUGGUGGAGCUUGUUUAAUUUUUCCUCUCCUAUAAGUGCUUAUGGAGAAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014764118.1
ncRNA:21   UGAAGAGGUAUUCGUGAAUAU   1
  |=||||=||||||||||||||
targets:902   AUUUCUUCAUAAGCACUUAUA   922

1.0 PREDICTED: Glycine max uncharacterized LOC100779185 (LOC100779185), transcript variant X3, mRNA uncharacterized LOC100779185(LOC100779185) coding protein psRNATarget
BT094177.1
ncRNA:21   UGAAGAGGUAUUCGUGAAUAU   1
  |||||||*|||||||||||||
targets:109   ACUUCUCAAUAAGCACUUAUA   129

1.0 Soybean clone JCVI-FLGm-14B17 unknown mRNA NA coding protein psRNATarget
XM_014765747.1
ncRNA:21   UGAAGAGGUAUUCGUGAAUAU   1
  |||||||*|||||||||||||
targets:690   ACUUCUCAAUAAGCACUUAUA   710

1.0 PREDICTED: Glycine max uncharacterized LOC100781365 (LOC100781365), transcript variant X5, mRNA uncharacterized LOC100781365(LOC100781365) coding protein psRNATarget
XM_014769360.1
ncRNA:21   UGAAGAGGUAUUCGUGAAUAU   1
  ||||||||||||*||||||||
targets:1495   ACUUCUCCAUAAUCACUUAUA   1515

1.5 PREDICTED: Glycine max protein IQ-DOMAIN 1-like (LOC100809448), transcript variant X5, mRNA protein IQ-DOMAIN 1-like(LOC100809448) coding protein psRNATarget
XM_014769359.1
ncRNA:21   UGAAGAGGUAUUCGUGAAUAU   1
  ||||||||||||*||||||||
targets:1518   ACUUCUCCAUAAUCACUUAUA   1538

1.5 PREDICTED: Glycine max protein IQ-DOMAIN 1-like (LOC100809448), transcript variant X3, mRNA protein IQ-DOMAIN 1-like(LOC100809448) coding protein psRNATarget
XM_006600966.2
ncRNA:21   UGAAGAGGUAUUCGUGAAUAU   1
  ||||||||||||*||||||||
targets:1521   ACUUCUCCAUAAUCACUUAUA   1541

1.5 PREDICTED: Glycine max protein IQ-DOMAIN 1-like (LOC100809448), transcript variant X4, mRNA protein IQ-DOMAIN 1-like(LOC100809448) coding protein psRNATarget
XM_014769358.1
ncRNA:21   UGAAGAGGUAUUCGUGAAUAU   1
  ||||||||||||*||||||||
targets:1525   ACUUCUCCAUAAUCACUUAUA   1545

1.5 PREDICTED: Glycine max protein IQ-DOMAIN 1-like (LOC100809448), transcript variant X2, mRNA protein IQ-DOMAIN 1-like(LOC100809448) coding protein psRNATarget
XM_006600967.2
ncRNA:21   UGAAGAGGUAUUCGUGAAUAU   1
  ||||||||||||*||||||||
targets:1644   ACUUCUCCAUAAUCACUUAUA   1664

1.5 PREDICTED: Glycine max protein IQ-DOMAIN 1-like (LOC100809448), transcript variant X6, mRNA protein IQ-DOMAIN 1-like(LOC100809448) coding protein psRNATarget
XM_006600963.2
ncRNA:21   UGAAGAGGUAUUCGUGAAUAU   1
  ||||||||||||*||||||||
targets:1649   ACUUCUCCAUAAUCACUUAUA   1669

1.5 PREDICTED: Glycine max protein IQ-DOMAIN 1-like (LOC100809448), transcript variant X1, mRNA protein IQ-DOMAIN 1-like(LOC100809448) coding protein psRNATarget
XM_014779022.1
ncRNA:21   UGAAGAGGUAUUCGUGAAUAU   1
  |||||||*|||||||||||*|
targets:508   ACUUCUCAAUAAGCACUUACA   528

2.5 PREDICTED: Glycine max cysteine synthase-like (LOC100796465), transcript variant X4, mRNA cysteine synthase-like(LOC100796465) coding protein psRNATarget
XM_014779020.1
ncRNA:21   UGAAGAGGUAUUCGUGAAUAU   1
  |||||||*|||||||||||*|
targets:594   ACUUCUCAAUAAGCACUUACA   614

2.5 PREDICTED: Glycine max cysteine synthase-like (LOC100796465), transcript variant X2, mRNA cysteine synthase-like(LOC100796465) coding protein psRNATarget
XM_014779021.1
ncRNA:21   UGAAGAGGUAUUCGUGAAUAU   1
  |||||||*|||||||||||*|
targets:618   ACUUCUCAAUAAGCACUUACA   638

2.5 PREDICTED: Glycine max cysteine synthase-like (LOC100796465), transcript variant X3, mRNA cysteine synthase-like(LOC100796465) coding protein psRNATarget
XM_014779019.1
ncRNA:21   UGAAGAGGUAUUCGUGAAUAU   1
  |||||||*|||||||||||*|
targets:704   ACUUCUCAAUAAGCACUUACA   724

2.5 PREDICTED: Glycine max cysteine synthase-like (LOC100796465), transcript variant X1, mRNA cysteine synthase-like(LOC100796465) coding protein psRNATarget
XM_014768458.1
ncRNA:21   UGAAGAGGUAUUCGUGAAUAU   1
  ||||||*|||||||||*||||
targets:597   ACUUCUACAUAAGCACCUAUA   617

2.5 PREDICTED: Glycine max protein ENHANCED DISEASE RESISTANCE 2-like (LOC100806040), transcript variant X4, mRNA protein ENHANCED DISEASE RESISTANCE 2-like(LOC100806040) coding protein psRNATarget
XM_014768459.1
ncRNA:21   UGAAGAGGUAUUCGUGAAUAU   1
  ||||||*|||||||||*||||
targets:598   ACUUCUACAUAAGCACCUAUA   618

2.5 PREDICTED: Glycine max protein ENHANCED DISEASE RESISTANCE 2-like (LOC100806040), transcript variant X5, mRNA protein ENHANCED DISEASE RESISTANCE 2-like(LOC100806040) coding protein psRNATarget
XM_014768457.1
ncRNA:21   UGAAGAGGUAUUCGUGAAUAU   1
  ||||||*|||||||||*||||
targets:601   ACUUCUACAUAAGCACCUAUA   621

2.5 PREDICTED: Glycine max protein ENHANCED DISEASE RESISTANCE 2-like (LOC100806040), transcript variant X3, mRNA protein ENHANCED DISEASE RESISTANCE 2-like(LOC100806040) coding protein psRNATarget
AK245564.1
ncRNA:21   UGAAGAGGUAUUCGUGAAUAU   1
  =|||*|||||||*||||||||
targets:1706   GCUUAUCCAUAAACACUUAUA   1726

2.5 Glycine max cDNA, clone: GMFL01-34-F02 NA coding protein psRNATarget
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