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BaseInfo

ncRNA ID novel_gma_miR1318
Species Glycine max
Class miRNA
Genome position Chr19:6745936-6746024 [+]
Reference genome Glycine_max_v2.0
Source SRR1292924;SRR1295527
Length 25
Mature sequence(if miRNA) 1 - UAUUGGACAUCACCAAUUUUGGUGG - 25
Stem-loop(if miRNA) --U      C                GG        ----C   UG
   AUUGGA AUCACCAAUUUUGGUG  UCUCACUU     UCA  A
   |||||| ||||||||||||||||  ||||||||     |||  C
   UAACUU UAGUGGUUAAAACCAC  AGGGUGAA     AGU  U
AAC      U                UA        AAUUU   UC
Stem-loop sequence UAUUGGACAUCACCAAUUUUGGUGGGUCUCACUUCUCAUGACUCUUGAUUUAAAAGUGGGAAUCACCAAAAUUGGUGAUUUUCAAUCAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003547017.3
ncRNA:25   GGUGG--UUUUAACCACUACAGGUUAU   1
  ==|==--||=||||||||*||||||||
targets:471   UUAUUGUAAGAUUGGUGAAGUCCAAUA   497

2.5 PREDICTED: Glycine max vinorine synthase-like (LOC100808502), mRNA vinorine synthase-like(LOC100808502) coding protein psRNATarget