Search result

BaseInfo

ncRNA ID osa_circ_040267
Species Oryza sativa
Class circRNA
Genome position 9:22754186-22755409[+]
Reference genome RGAPv7
Source PlantcircBase
Method SMALT and Segemehl/find_circ/NA
Type exonic
Splice junction sequence TGGGTGGCAAAGTTCTATATAAGTTTGCAGATGAAAAGGAGAAGGAGATGCATCGAGCCAAAGAAACGGATGCGATGGTCAAGATGTTGTCACAATACAATAATTTCTGATGTATTCTCGAATATGTTTCACTTTAGGCAGATGAAATCATGTATGATGATGGGGTTATTCAAATGGATGGTGCTGATGAATTGGCAACG
Tissues leaf/root/shoot, root
Exon boundary Yes-Yes
Splicing signals AG-GT
circRNA sequence NA
Genomic sequence TGGGTGGCAAAGTTCTATATAAGTTTGCAGATGAAAAGGAGAAGGAGATGCATCGAGCCAAAGAAACGGATGCGATGGTCAAGATGTTGTCACAATACAAAAACCTTTGTGGATCAAGAAAGGTGATACTAATTATCCTTCGGTTCTTAGTTTGAATCATGTGAGTCCGATTAAGCAGTGCTTATTTAAGCATCCCACTCATCTGACAAGTATAAATCAGATATTAATTCTATGAGATTTTCAGGGTTTCTTATTTGTAAGCATATAGCAAATTCATAAACTACTATGGAGTACATAAGAATGTTTTCTGCAGTCCTTCCTAAAAAAGCGTGGAAATGAGTTCTAGTTGTAAATACTAGAATTTTGCCTTAGGTCTACTATTTGAACCCCAAATATGCAATGAATGAGCTTCCTACCATATGGTGAATAATTGACTTCAACGATATTGACAGTTGAACCAATAAAATATAAGTGTGGTGGGATAGTTACTATTTGGCCAAAAAAAAGAAAAGAAAAAGAAATCATGTTATCTAAGCAGGCTGTCCGTACAGGTTAGGGCACATTACCTTTCACACGATGATGTTCTTGCTGGTGTTGTGAATCTGATAAAGAAGCTCAAAATTAAGAGAATTATCATTGGTTCAAGGTAAGATCCCAAATTCTACATTTTGAATTTCCATTCCTTCTTTCAAAAGAGATCCATTTCTCTATTGGCATATATTACTCCATGCGCATGCTAAACCAGGGTATTATGCAGGAGCATGTCAAAGGAAGCGATGCTGCGCAAATGCTGTCAGGTTTGGGTGGTTATCAATGGAAAACACATGTGTACTAGGTATAGTTTGAGATATTCTCCAAAATCTATAATCAACACCTGCAGCAATATTGGATCAAATCTAGCAACAAGTTCATGGATGAGATCATTCTAAAATGCAGCAATGATCATCTGGAACATACCGGGAGCATTGGATATGGAGGGAGCGCTGAATCTTTGGCATCTGTACATGAGCTGAGCGATGATTCAAATGGCTACACAACACCACCAAGTGATTTTGTAAGCGGCTTCCTAGCAAAGCACTAAACAAATGCATGCAGTCTATGATCTTGGTTCAGATTTCGAATACTAATTTCTGATGTATTCTCGAATATGTTTCACTTTAGGCAGATGAAATCATGTATGATGATGGGGTTATTCAAATGGATGGTGCTGATGAATTGGCAACG