ncRNA ID | bra-miR158-3p |
Species | Brassica rapa |
Class | miRNA |
Genome position | chrA8:3271798-3271904 [+] |
Reference genome | Brapa_1.1 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 66 - UUUCCAAAUGUAGACAAAGCA - 86 |
Stem-loop(if miRNA) |
AUA  -       AUCU   CUU         U            -AUU    A    GC ACGUUAU    GUU   CUUUGUCUA CGUUUGGAAAAG    GAUG C    || |||||||    |||   ||||||||| ||||||||||||    ||||    UG UGCAGUA    CAA   GAAACAGAU GUAAACCUUUUC    CUAU G AGA  C       GUGC   AAC         -            ACAU    C |
Stem-loop sequence | AUAGCACGUUAUAUCUGUUCUUCUUUGUCUAUCGUUUGGAAAAGAUUGAUGACGCUAUCUACACUUUUCCAAAUGUAGACAAAGCAAAACCGUGAUGACGUCGUAGA |
1 | PMID:24559317
"Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensis by high-throughput sequencing and degradome analysis"; Jiang J, Lv M, Liang Y, Ma Z, Cao J; BMC Genomics. 15:146(2014). |