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BaseInfo

ncRNA ID novel_gma_miR1314
Species Glycine max
Class miRNA
Genome position Chr6:51043526-51043609 [-]
Reference genome Glycine_max_v2.0
Source SRR1451642
Length 20
Mature sequence(if miRNA) 1 - UGAAAGGCUGAUUUGAUAGC - 20
Stem-loop(if miRNA) --GAG          C      AG          C      U
     CAAAUUAGUC UUCAAA  UUUGAAGUGA AUCGAU A
     |||||||||| ||||||  |||||||||| ||||||
     GUUUAGUCGG AAGUUU  AAAUUUCACU UAGUUA A
CGAUA          A      CU          U      A
Stem-loop sequence GAGCAAAUUAGUCCUUCAAAAGUUUGAAGUGACAUCGAUUAAAAUUGAUUUCACUUUAAAUCUUUGAAAGGCUGAUUUGAUAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771947.1
ncRNA:20   CGAUAGUUUAGUCGGAAAGU   1
  *|*|*|||||||||||||||
targets:1805   UCCAGCAAAUCAGCCUUUCA   1824

2.0 PREDICTED: Glycine max putative GTP diphosphokinase RSH1, chloroplastic (LOC100814134), transcript variant X2, mRNA putative GTP diphosphokinase RSH1, chloroplastic(LOC100814134) coding protein psRNATarget
XM_003553611.3
ncRNA:20   CGAUAGUUUAGUCGGAAAGU   1
  *|*|*|||||||||||||||
targets:2094   UCCAGCAAAUCAGCCUUUCA   2113

2.0 PREDICTED: Glycine max putative GTP diphosphokinase RSH1, chloroplastic (LOC100814134), transcript variant X1, mRNA putative GTP diphosphokinase RSH1, chloroplastic(LOC100814134) coding protein psRNATarget