Search result

BaseInfo

ncRNA ID osa_circ_040247
Species Oryza sativa
Class circRNA
Genome position 9:22686796-22687250[+]
Reference genome RGAPv7
Source PlantcircBase
Method SMALT and Segemehl/find_circ/circseq_cup/NA
Type exonic
Splice junction sequence GGAGGCAGCCAGCAGAGACGAACAAGCAGAAGAGTCAAAGCCAAAGCAACAAAAGGAAGGGAAAGGGAAGGAGATGGAAGGGATGCGATGCCGTCATGATATCTTCAGTTCTTCACTAGCAGGAGCTGGAGCTAGAGCTGCATCCATTCCGCTCACATCGCAGCCTCGCAAGGAGGAAGGAGGTGGTTTCTTGACTTGAT
Tissues leaf and panicle/root/root/shoot, root, anther, seed, pistil
Exon boundary Yes-Yes
Splicing signals AG-GT
circRNA sequence GGAGGCAGCCAGCAGAGACGAACAAGCAGAAGAGTCAAAGCCAAAGCAACAAAAGGAAGGGAAAGGGAAGGAGATGGAAGGGATGCGATGCCGTCATGATAGCTAGCGAATCTCGTGGTGGCCGGGCCTAACCTTTTGCCATCATTTTCCTTCCACGGCCTACAGAATCCAGCATATCTGCTGCTCTCATGATGCTCTTGCACTGCCTCTGCCTTGCATTAATAGGCTCGCTCCGAGGGCTGGATCAAGTGAAATGATGACCATTCGAGCTGCTCACGTTACCTATGTCAATTCTGCACTGCTGCTCCTTCCTTTTGCTTCTATAAATACCTTACCTTGTGCTGTTGCTGCTTCAATCTTCAGTTCTTCACTAGCAGGAGCTGGAGCTAGAGCTGCATCCATTCCGCTCACATCGCAGCCTCGCAAGGAGGAAGGAGGTGGTTTCTTGACTTGAT
Genomic sequence GGAGGCAGCCAGCAGAGACGAACAAGCAGAAGAGTCAAAGCCAAAGCAACAAAAGGAAGGGAAAGGGAAGGAGATGGAAGGGATGCGATGCCGTCATGATAGCTAGCGAATCTCGTGGTGGCCGGGCCTAACCTTTTGCCATCATTTTCCTTCCACGGCCTACAGAATCCAGCATATCTGCTGCTCTCATGATGCTCTTGCACTGCCTCTGCCTTGCATTAATAGGCTCGCTCCGAGGGCTGGATCAAGTGAAATGATGACCATTCGAGCTGCTCACGTTACCTATGTCAATTCTGCACTGCTGCTCCTTCCTTTTGCTTCTATAAATACCTTACCTTGTGCTGTTGCTGCTTCAATCTTCAGTTCTTCACTAGCAGGAGCTGGAGCTAGAGCTGCATCCATTCCGCTCACATCGCAGCCTCGCAAGGAGGAAGGAGGTGGTTTCTTGACTTGAT