Search result

BaseInfo

ncRNA ID osa_circ_040239
Species Oryza sativa
Class circRNA
Genome position 9:22684491-22685163[+]
Reference genome RGAPv7
Source PlantcircBase
Method circseq_cup
Type exonic
Splice junction sequence AGAAACAAGACTGAGAAGGATCCTGCATTTAATAGAAACAGGCAAAACAACAGGGTGGCGATATTTCGAGACCGTGAGTCAGATCGCAAGGATCCTGATTGGAGGTTCATACACTATTCAACCTTTGTATGCCCCTGCTGTTAACTACAACACTGAGTTCCCTCAGCTTGGGTCTCATGGGTCTCCAGTTCCTGTTGAAC
Tissues root
Exon boundary No-No
Splicing signals AT-AG
circRNA sequence AGAAACAAGACTGAGAAGGATCCTGCATTTAATAGAAACAGGCAAAACAACAGGGTGGCGATATTTCGAGACCGTGAGTCAGATCGCAAGGATCCTGATTATGACAGAAGCTATGACAGGTACATGCAAAGATTTGATCCTGGATTTGGATTTAATGGAGGTTCATACACTATTCAACCTTTGTATGCCCCTGCTGTTAACTACAACACTGAGTTCCCTCAGCTTGGGTCTCATGGGTCTCCAGTTCCTGTTGAAC
Genomic sequence AGAAACAAGACTGAGAAGGATCCTGCATTTAATAGAAACAGGCAAAACAACAGGGTGGCGATATTTCGAGACCGTGAGTCAGATCGCAAGGATCCTGATTATGACAGAAGCTATGACAGGTCCGTTTAACGTAATAAACTTTATTTTTGTAACTCTTTAGCTATAGAATGTTTTGCCATTCCACCGTACAGTTCCTATTTATTATTGGTGAACCATTTAGTACTCTCAATATTTCACGTGCATCCTAAACTATCAAAGTAGCTCATGGGTGATCTATGCAATCATCCATATAAGCATTTCATTCATATAACTATTAGATTGCAAATTTAAACTCTAATTCTAAGAGAAGCTTGTGTAAAACACATCAACAGGAGGTAATCATGTGATAATATGTTAAAGATACAAAGAACAATGGGGACTGACTTTCAAACCAAAATGTAACTCTATTAAAACTACCTGTTGACTTTTTTGTTATGTCAGTGAAGACAAGGACTGCCCTTTTGTATCAAGCCAACTCATCATGAATGGCTTTACAGGTACATGCAAAGATTTGATCCTGGATTTGGATTTAATGGAGGTTCATACACTATTCAACCTTTGTATGCCCCTGCTGTTAACTACAACACTGAGTTCCCTCAGCTTGGGTCTCATGGGTCTCCAGTTCCTGTTGAAC