ncRNA ID |
osa_circ_040205 |
Species |
Oryza sativa |
Class |
circRNA |
Genome position |
9:22410735-22411666[-] |
Reference genome |
RGAPv7 |
Source |
PlantcircBase
|
Method |
SMALT and Segemehl/find_circ/NA |
Type |
exonic |
Splice junction sequence |
CTGGGTGGTTGTTATGTCAGTCATAACTGTTGAACCACATCTGTTGTGAGGGACCAACTCATCAAACCGGTCAAGGAAGATCAGAAGTGGACCATCACGTAACCTGTAGTCATAGGCAGAGTTCCTAGAACCTTGAAGATCCCTATCTTTTCTTTGTTCACTAACAAAGGGAATGACATCCCTGGATACATCACACCGAT |
Tissues |
leaf and panicle/root/shoot, root, seed |
Exon boundary |
Yes-Yes |
Splicing signals |
AC-CT |
circRNA sequence |
NA |
Genomic sequence |
CTGGGTGGTTGTTATGTCAGTCATAACTGTTGAACCACATCTGTTGTGAGGGACCAACTCATCAAACCGGTCAAGGAAGATCAGAAGTGGACCATCACGTGATTCAGGTCTCTGTATGCAGGTGTTGATCTACAATTCATTCAATAGTTAATTATAATAGTATCAAATACAAACAAATAAAATGACAAAAATTAACTGTGAAAGTATACCTTAAGCCATATCTTACCTGTGAGACAGAGTCAGAAGGGAAGTCCTTGATGAGTGACGAAGCATCCACGCTCGCAACAGGAAGACCAAGGGTCCTTCCTATCCCTTCAACCACAGCTTTTTTATCACATGGACCATGTAAGAGAAATGTCATTTTGCCCTTTGTGGCCTCATGTGGGAGGTGAGTATAGTAACTCATGAAATTACCAATCATCTGCAAATTAACAAAGATACAACATGAGAAACAAAAAAAGATCAAGATATATAGTCAAGTAAAGGCCTTAGACAAACTAGAACTATCTCATCCTTAGACAAACTAGAACTATCTCAATTCATACATACCACTAGAAGAACTAACTCAATCCATACCTTACTGGCTCTGCCAACCACATTAGAAAGAGCGGGGTCATCCACCATTTTCATTTGCAGAGGAGTTGCAATGACTGGATGTAAGATTGGTGGGTACAGGGTCTCTCCAACAGTTTTCTCATCACTACCTTTCCAAATCATGATCTTGGTCCCTGAGGTAATTTGTCCTGGGAGTTTATGAAAAGAAAACACCGTTGGTTATAATAATTTCAGTATGCACTCAACAGATTTAAAATATATATGCTGGAATAAGTCCAACCTGTAGTCATAGGCAGAGTTCCTAGAACCTTGAAGATCCCTATCTTTTCTTTGTTCACTAACAAAGGGAATGACATCCCTGGATACATCACACCGAT |