Search result

BaseInfo

ncRNA ID osa_circ_040205
Species Oryza sativa
Class circRNA
Genome position 9:22410735-22411666[-]
Reference genome RGAPv7
Source PlantcircBase
Method SMALT and Segemehl/find_circ/NA
Type exonic
Splice junction sequence CTGGGTGGTTGTTATGTCAGTCATAACTGTTGAACCACATCTGTTGTGAGGGACCAACTCATCAAACCGGTCAAGGAAGATCAGAAGTGGACCATCACGTAACCTGTAGTCATAGGCAGAGTTCCTAGAACCTTGAAGATCCCTATCTTTTCTTTGTTCACTAACAAAGGGAATGACATCCCTGGATACATCACACCGAT
Tissues leaf and panicle/root/shoot, root, seed
Exon boundary Yes-Yes
Splicing signals AC-CT
circRNA sequence NA
Genomic sequence CTGGGTGGTTGTTATGTCAGTCATAACTGTTGAACCACATCTGTTGTGAGGGACCAACTCATCAAACCGGTCAAGGAAGATCAGAAGTGGACCATCACGTGATTCAGGTCTCTGTATGCAGGTGTTGATCTACAATTCATTCAATAGTTAATTATAATAGTATCAAATACAAACAAATAAAATGACAAAAATTAACTGTGAAAGTATACCTTAAGCCATATCTTACCTGTGAGACAGAGTCAGAAGGGAAGTCCTTGATGAGTGACGAAGCATCCACGCTCGCAACAGGAAGACCAAGGGTCCTTCCTATCCCTTCAACCACAGCTTTTTTATCACATGGACCATGTAAGAGAAATGTCATTTTGCCCTTTGTGGCCTCATGTGGGAGGTGAGTATAGTAACTCATGAAATTACCAATCATCTGCAAATTAACAAAGATACAACATGAGAAACAAAAAAAGATCAAGATATATAGTCAAGTAAAGGCCTTAGACAAACTAGAACTATCTCATCCTTAGACAAACTAGAACTATCTCAATTCATACATACCACTAGAAGAACTAACTCAATCCATACCTTACTGGCTCTGCCAACCACATTAGAAAGAGCGGGGTCATCCACCATTTTCATTTGCAGAGGAGTTGCAATGACTGGATGTAAGATTGGTGGGTACAGGGTCTCTCCAACAGTTTTCTCATCACTACCTTTCCAAATCATGATCTTGGTCCCTGAGGTAATTTGTCCTGGGAGTTTATGAAAAGAAAACACCGTTGGTTATAATAATTTCAGTATGCACTCAACAGATTTAAAATATATATGCTGGAATAAGTCCAACCTGTAGTCATAGGCAGAGTTCCTAGAACCTTGAAGATCCCTATCTTTTCTTTGTTCACTAACAAAGGGAATGACATCCCTGGATACATCACACCGAT