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BaseInfo

ncRNA ID novel_gma_miR1309
Species Glycine max
Class miRNA
Genome position Chr5:38325160-38325238 [-]
Reference genome Glycine_max_v2.0
Source SRR1451642;SRR1451613;SRR1451619;SRR1451620;SRR1451622
Length 21
Mature sequence(if miRNA) 59 - UUCUGAACUCUCUCCCUCAAU - 79
Stem-loop(if miRNA) ---   U        -U      AU  UCAUUGUUACAGAUC
   UUC GAACUCUC  CCCUCA  AC               U
   ||| ||||||||  ||||||  ||
   AAG CUUGGGAG  GGGAGU  UC               U
AGA   -        UU      --  UCGAAGAAUGCUUUC
Stem-loop sequence UUCUGAACUCUCUCCCUCAAUACUCAUUGUUACAGAUCUUCUUUCGUAAGAAGCUCUUGAGGGUUGAGGGUUCGAAAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003529651.3
ncRNA:21   UAACUCCCUCUCUCAAGUCUU   1
  ****|||||||||||||||||
targets:2849   CAAAAGGGAGAGAGUUCAGAA   2869

2.0 PREDICTED: Glycine max dynamin-2A-like (LOC100809385), transcript variant X1, mRNA dynamin-2A-like(LOC100809385) coding protein psRNATarget
XM_006581024.2
ncRNA:21   UAACUCCCUCUCUCA-AGUCUU   1
  |||||||||||||||-||||||
targets:1000   AUUGAGGGAGAGAGUAUCAGAA   1021

3.0 PREDICTED: Glycine max uncharacterized LOC102664389 (LOC102664389), mRNA uncharacterized LOC102664389(LOC102664389) coding protein psRNATarget