ncRNA ID | novel_gma_miR1309 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr5:38325160-38325238 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451642;SRR1451613;SRR1451619;SRR1451620;SRR1451622 |
Length | 21 |
Mature sequence(if miRNA) | 59 - UUCUGAACUCUCUCCCUCAAU - 79 |
Stem-loop(if miRNA) |
---   U        -U      AU  UCAUUGUUACAGAUC    UUC GAACUCUC  CCCUCA  AC               U    ||| ||||||||  ||||||  ||    AAG CUUGGGAG  GGGAGU  UC               U AGA   -        UU      --  UCGAAGAAUGCUUUC |
Stem-loop sequence | UUCUGAACUCUCUCCCUCAAUACUCAUUGUUACAGAUCUUCUUUCGUAAGAAGCUCUUGAGGGUUGAGGGUUCGAAAGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003529651.3 |
|
2.0 | PREDICTED: Glycine max dynamin-2A-like (LOC100809385), transcript variant X1, mRNA | dynamin-2A-like(LOC100809385) | coding protein | psRNATarget | |||||||||
XM_006581024.2 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC102664389 (LOC102664389), mRNA | uncharacterized LOC102664389(LOC102664389) | coding protein | psRNATarget |