ncRNA ID | novel_gma_miR1307 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr5:11320020-11320198 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451642 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGGAGAAUCUGAAUGAAAGUUUU - 24 |
Stem-loop(if miRNA) |
--         C   AU    -      --AAAAAAAA   A    A    AA         -    -------------AA     ACAUCGCUCGAGA   AAGGAGAAU UGA  GAAA GUUUUU          AAG GAAA AAGA  AGAAAAAGG UUUC               GUCUC             U   ||||||||| |||  |||| ||||||          ||| |||| ||||  ||||||||| ||||               |||||   UUUCUUUUA ACU  CUUU CAAAGA          UUC CUUU UUCU  UCUUUUUUC AGAG               UUUGU             A UC         A   -C    A      GUUAACUCUG   -    C    --         G    AUAUAUAUCCCUCAU     GAUAAGCUCACAA |
Stem-loop sequence | AAGGAGAAUCUGAAUGAAAGUUUUUAAAAAAAAAAGAGAAAAAAGAAAAGAAAAAGGUUUCAAGUCUCACAUCGCUCGAGAUAAACACUCGAAUAGUGUUUUACUCCCUAUAUAUAGAGAGCUUUUUUCUUCUUCUUUCCUUGUCUCAAUUGAGAAACAUUUCCUCAAAUUUUCUUUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014765828.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100776750 (LOC100776750), transcript variant X6, mRNA | uncharacterized LOC100776750(LOC100776750) | coding protein | psRNATarget | |||||||||
XM_014765834.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100776750 (LOC100776750), transcript variant X12, mRNA | uncharacterized LOC100776750(LOC100776750) | coding protein | psRNATarget |