Search result

BaseInfo

ncRNA ID	osa_circ_040124
Species	Oryza sativa
Class	circRNA
Genome position	9:21803860-21808364[-]
Reference genome	RGAPv7
Source	PlantcircBase
Method	find_circ
Type	exonic
Splice junction sequence	CATGTAAACTTTGCCAAAACCTCCTTGCCCAATCTTATTTGCTTCTGAGAAATTGTGGGTTGCTAGAGCAATATCCTCAAATCTTACAAATGGAAGTTCAATTTTGCGATAAGAATAACTTCATTCCTGAATTCCTCTGTCCCTTGTCGAGAATCCTTACTTAACCTCTTAACAGCAACTTCCTGACCACCTAGCATTGC
Tissues	root
Exon boundary	Yes-Yes
Splicing signals	AC-CT
circRNA sequence	NA
Genomic sequence	CATGTAAACTTTGCCAAAACCTCCTTGCCCAATCTTATTTGCTTCTGAGAAATTGTGGGTTGCTAGAGCAATATCCTCAAATCTTACAAATGGAAGTTCAAGATCTTGGACAGGGTTCCCTTGCCCAATCTCTTCAGATGTATTCGCACCATCGAAAATTAGCTTCCTGTGCTTTTCCCGGTTTCTTTTCTTGCCTGCTCAGAAAATCAAAAGTATCCAACGTTAATTTTCTGATGACTGTACCATGGGGCTTCTAAGAAAAGAAAAGAATACTGAATATACCTTTAATTTTTAACCATGCAAAGGACATGCATAGGACAATAATAATGCTGCTTAACACTGGCAGAACAACCTTGAGTACGGCATTGATCTTCGTCCTCCGACCTTTACAACAGTACAAAACGCTGCAAACTTTTACGATCCAACTAGCAATTGTATTTTTTAAGAAAGAAAGGAAGTAGTAAATTGTAACATAGCGATCCTTGGCACGGTTTCTATTGTAAATTTTGGTACCTAAGCTAATAAAAATAAACTAAAAAGGTGGTATTAAAAGGTACCGAGTAGTGGAGTACTAAAGCATATAATCGGAAAACTATATTCATCCCTTAAAGGGATATCCCCTCGTTTTTACATTTCACTTAAAAAGTCATCAAAAAATTATTATGATGGATCAACATGTAATATGTCACTTCACGAACATGTATATTCAAATTCAACTTATATAAGTAGAAAAAAAATATAATAAATTTGATTATGAAAAGAACGTGTAATTCACAGTCAAATTTGTTATTTTTTTGAATTGTATAAGTCGAATTTTAATTTGCATGTTTGCGAAACAATATATCATATATTGATCTATCTTAACATTTTTTTTCAATTATTTTGATAACTTTTTAAATGTCATGCATAAAACGAGAAGATGTCCTCTTAAGGGACAAGAATCCACTTCTCATATAATCACTGAAATTGTAACCACTTTTTTTTTTGCGAGGAAAATTGTAATCATGCATTTACCCGCGTCAATGCTGGCAAGCCTAAGGTGGATCGTGTCACTTTCAGGCCATTCGCCTATCTTCTCTGTGTCAATCAGCTCGCCTGACCACACCAAGCACCTCGTCACGTCGCCCTCTGATATGCTGCTACTCAGGTTGGCGTAGGCGTACGCCACGCAGGAGCAGTTGTTGCTGCACTCGGCGGCGCACGCGTCGAGCGTCCTGTTCGGGACGTGCACGAACTTGTCCGGCGACTTCATCCCCGGCACGGCCAAGAAACGGTCGCTGCACTGCACCGCCTCCGTCCGCCGGCAACCACGCGAGAACCGGCCGCTGTTCCACTCCTCCGCGCTCGCCGGCTCGAACCCTGCGAGGCACTTGCACGTCGGGACGGCAGGCGCCCTCGCCGTGTTGTCGCACAGTAGCCGTTCGGGCCGCAGTAGTTGTAGTAGTTGCAGTCCCATCTAGGCAACTCGGCGACCACCGCCCACGCTGACGAGCTGATGTTCCAGCGCTGGAACTGGTACCTGCCGGCGTAGGTAATCACATACCTGGTGTGCGGCGAGCCCTCGGAGACGCTGAACGTTATGTATCTCTTCTCGTCGTTGTCGACAACAGAGAAGTAGAAGATGTCGCTGGAATTCACTTGCAGGTACCGGCTCAACATCATGTAGCCCGTCCATGGCGCGTCCCTCGAAACCGGGCGCGTCCCTTTCCGGACGAACACCTGGAGGAACGTGTCCGGGTCGCCGCCGAACGAGAAGCTTCCCGGCGACGGGTCACCGGGGCCCCTCCACGACACCAAGCGATCGGAGACACGCGTCTTGAACGTCATCCCAAGCTTCATCCCAGGGAGGAACGAGTCGGTGGGGTGATCGAAGCTCTTCCACAGGATGGTGCCGTTCGGTGACCGGATGACGAGGTTGCCGGTGTTCAGGAGCACCGCCGTGGAGCCGGAGCCCGCTGCATCGTCGGTGATGTTGGTCGACCAGCGAACGCGGCCGTCAGCGTCAGACAAGACAAGGTTGGAGGAGTTGGTAAGCGACAGCGTCGGCGCAGACGAACTAGTGTTTGTGACCGGAGTTCCTCGGTCGGCGACCCACACCACCGTGCGCTGGGGGATGTCGTTGTACCATATGCCGAGGTACATCTTCTCCGGAGTGGCAGTTGAGGGGGAGAAAAAGCTCAAGGCGAAGGCACCGCCGTCGGAGACGAGGGTGGCGCCAGGGGAGAGCGGCTTGCCGGTGACAAGCCGGTCGTCGGATGCACATGGCGGCGGCAGGAGGAGGAGAACACTGGTGATGCAGGCTAAAGCCGCAGCTGATCGATCCATCAGAACCTTCTTCCTTTTCAGTATGAGCTTGCACTGAGCAAGTGAAGTGAGCAGGCTACAATGCTATATCATTGCCTGCGTGTGAAATATAGATTTTGGAACAACTTGGGGAAACTGTTTTAAACACTCGGGTGGACGTCCACCCGAGATATTAGAATCCATCCTCAACAACTTGGCCCACTTCCCTGGCAACGTTGGCAACTTTCCGTACTTGGTTTACCACTTCACACAATGAAACATCATAAAATAGACTTCCTGCCCCTCAATCCCTCATTGACAAGGGATGAAAAGGAAAACTCTTTACCTCAGCGGCTATGAAAACCTTGGTCCGTTAAATCCAGTTGTTCCCCATCTTGTGTACTGAAAGAGACTGATCGCTACAGATCGTGACGAGCTTTTATGTATAGGAAAGGTGAAGACCCGGCAAGTCTCAAAGCAGGAGCAAAGCTTGGTAAACTGGTCTACTGTTTCATTGCAAAGCGACGAGCATAGAGAACTTGTCCGGCACCTTCATCCGCGGCAGCGCCAAGAAATCATCGGCGGCGTCGCACGGGCAGCGCCTCCTTCCGCCGGCAACCCCCCGAGAACCTGCCGGTGCTCCACTCCTCGCCGCTCGCCGGCTCGAAGCCGTCGAGGCACTTGCGCGTGGCGGCGGCACCCGTCGGTGATGTCGCAGTTGCCGTACGTGCTGCACTGGTGCGTCGGGATTCGGGAACGAGTTGAAGGTGACTTAGCTTCATATGAATGCATACCCTTCGTGTCAGTCAACGTTCTGTCTGTTCAACTGAGTGACATCCTACACTTGTACAGATGTTGGCTTTTACTTTTTAAGTATAATGTGTTGTTTAGATTTTTTTAGATTTTTTTTTGTGATATAACGAGAAAGACCAAAGAAAGGGCTAGAAAAGAATAGCAACAAATTGAGTTCCAAACCACAAATCATGCATCAGCTGTCTGCATTTTTCTTTGGACAGTGATTGTTACATCCTAAGTCAAAGAATTATCCTTAGCTACCTCCCCTCTATATCTGTTAGCGTAAAAGTATTCATTGAGTTCTGAATATTATCTCTCAATTGCTCTATTTCAGAACTCCTTTGTGCAAAATAGGCAGGGCTATTTGGGGCTGGAAGTGCAGTATTACTCCCATTGTCCAGGAAGAACACAACGGATGACATAAGTGGTCTATCATCAGGGTTTTCTTGAACACACAACAGTGCTACATGGATACAGAGCAAAACTTCATGCAGTAAGCAACTATCCATAATTGATGAGTCTGCCAAATCCTTCATCTTCTCTTCCTTCCACATGTTCCACGACTGAAACAATGAAAAGCAATATTTGGTTATAAACCAAGAAAAAAATCCAAAATCTTCTAATTTTAATCTGAGATAAATCTACAGAAAAGATATATACTCACAAAAACTATGAGGTTTGGAAAACCCATGATGTTACTAGTCGAGCTTCTCCTTATACCAGTTACAACCTCCAATAGTAACACACCAAAGCTATAGACATCGGATTTAGTAGAAAAGATACCTTCCATTGCATACTCAGGAGCCATGTAACCACTGTAACCATTTCAATTGCAAGAGTTACTAAACATGATTTAAATTAATCACACTTACTTTGAACAATTAATTCAAATAGAAACTCACTATGTTCCAACAACACGTCGAGTATTTGTATTTTGTTGATTATCACCAACGATCCTCGCCATACCAAAGTCTGCTATCTTGGGTTTCATCTCTGCATCTAGCAAAACATTGCCAGCTTTAAGATCTCTGTGAATTATGGTTAATCTTGAGTCTTGGTGTAGATAAAGAAGTCCCCTTGCCACTCCTTTGATTATATTAAACCGTGTTCTCCAGTCTAGTTTCAATTTCCTCGAAACATCTATAGAAAGAAGCAAATGTAAGCAATCTATTGTCAAGTCGATTTAGTAGCTTATGCTTGATATGTCACCAGGGCATACCAAAAAGGGTAGCATCTAGGCTTTTGTTTGGTAAGTACTCATAAATTAGCAGCTTTTCATCTCCCTCAACACAACAACCAAGAAGGCGAACCAAATTCCTATGCTGCAATTTTGCGATAAGAATAACTTCATTCCTGAATTCCTCTGTCCCTTGTCGAGAATCCTTACTTAACCTCTTAACAGCAACTTCCTGACCACCTAGCATTGC