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BaseInfo

ncRNA ID	novel_gma_miR1297
Species	Glycine max
Class	miRNA
Genome position	Chr20:47833113-47833245 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451642
Length	19
Mature sequence(if miRNA)	115 - AUCGACUUUGACCAAACCU - 133
Stem-loop(if miRNA)	-AUC     U    -     U   AUUCGA        GAAU    UAAG        A     UAUAUA     GACUU GACC AAACC AUU      AGUGAUUA    AGUU    UUGGGUUG AUUUA      U     ||||| |||| ||||| |||      ||||||||    ||||    |||||||| |||||      U     CUGAA CUGG UUUGG UGA      UCACUGAU    UCAA    AACUCAAC UAAAU      U UUUA     -    A     U   --ACAA        ----    -CCA        A     CUUCUU
Stem-loop sequence	AUCGACUUUGACCAAACCUAUUAUUCGAAGUGAUUAGAAUAGUUUAAGUUGGGUUGAAUUUAUAUAUAUUUUUCUUCUAAAUACAACUCAAACCAACUUAGUCACUAACAAGUUGGUUUAGGUCAAGUCAUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK245517.1	ncRNA:19   UCCAAACCAGUUUCAGCUA   1   *||||||||||||||*||| targets:745   UGGUUUGGUCAAAGUAGAU   763 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-32-M22	NA	coding protein	psRNATarget
XM_006578682.2	ncRNA:19   UCCAAACCAGUUUCAGCUA   1   *||||||||||||||*||| targets:915   UGGUUUGGUCAAAGUAGAU   933 Target Full Sequence	2.5	PREDICTED: Glycine max chaperone protein ClpD, chloroplastic-like (LOC100800786), mRNA	chaperone protein ClpD, chloroplastic-like(LOC100800786)	coding protein	psRNATarget
XM_003526860.3	ncRNA:19   UCCAAACCAGUUUCAGCUA   1   *||||||||||||||*||| targets:1039   UGGUUUGGUCAAAGUAGAU   1057 Target Full Sequence	2.5	PREDICTED: Glycine max chaperone protein ClpD, chloroplastic (LOC100793074), mRNA	chaperone protein ClpD, chloroplastic(LOC100793074)	coding protein	psRNATarget
XM_014774672.1	ncRNA:19   UCCAAACCAGUUUCAGCUA   1   ||*|||||||||*|||||| targets:346   AGAUUUGGUCAACGUCGAU   364 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102661438 (LOC102661438), mRNA	uncharacterized LOC102661438(LOC102661438)	coding protein	psRNATarget