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BaseInfo

ncRNA ID novel_gma_miR1294
Species Glycine max
Class miRNA
Genome position Chr19:27403996-27404051 [-]
Reference genome Glycine_max_v2.0
Source SRR1451642;SRR1451609;SRR1451617
Length 22
Mature sequence(if miRNA) 1 - UUAUGGACAAUGUUAGAAUGGU - 22
Stem-loop(if miRNA) --   G      -GA      C      G
  CAU UUGACA   UCCGUA AAAGAU A
  ||| ||||||   |||||| ||||||
  GUA GAUUGU   AGGUAU UUUCUA A
UG   A      AAC      -      U
Stem-loop sequence CAUGUUGACAGAUCCGUACAAAGAUGAAUAUCUUUUAUGGACAAUGUUAGAAUGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006591186.2
ncRNA:22   UGGUAAGAUUGUAACAGGUAUU   1
  ||||*|||||||||||||||||
targets:2000   ACCACUCUAACAUUGUCCAUAA   2021

1.0 PREDICTED: Glycine max uncharacterized protein At5g39865-like (LOC100805215), transcript variant X3, mRNA uncharacterized protein At5g39865-like(LOC100805215) coding protein psRNATarget