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BaseInfo

ncRNA ID novel_gma_miR1292
Species Glycine max
Class miRNA
Genome position Chr19:32871408-32871503 [-]
Reference genome Glycine_max_v2.0
Source SRR1451642;SRR1451612;SRR1451613;SRR1451624
Length 24
Mature sequence(if miRNA) 73 - AUUAGGACAACCGAUGUAGAAAUC - 96
Stem-loop(if miRNA) --         A           A  CAA  -     A  UG    UAA
  AUUAGGACA CCGAUGUAGAA UC   CA UUCUA GA  GGUU   A
  ||||||||| ||||||||||| ||   || ||||| ||  ||||
  UAAUCCUGU GGCUACAUCUU AG   GU AAGAU CU  UCAA   G
AA         C           C  AUG  U     -  GU    CCA
Stem-loop sequence AUUAGGACAACCGAUGUAGAAAUCCAACAUUCUAAGAUGGGUUUAAAGACCAACUUGUCUAGAAUUGGUAGACUUCUACAUCGGCUGUCCUAAUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014767461.1
ncRNA:24   CUAAAGAUGUAGCCAACAGGAUUA   1
  *||||||||||=||||||||||||
targets:2108   UAUUUCUACAUUGGUUGUCCUAAU   2131

1.5 PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA putative dual specificity protein phosphatase DSP8(LOC100787468) coding protein psRNATarget
XM_014767461.1
ncRNA:24   CUAAAGAUGUAGCCAACAGGAUUA   1
  *|*|*|||||||||||*|||||||
targets:2250   CAAUCCUACAUCGGUUAUCCUAAU   2273

1.5 PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA putative dual specificity protein phosphatase DSP8(LOC100787468) coding protein psRNATarget
XM_014771283.1
ncRNA:24   CUA--AAGAUGUAGCCAACAGGAUUA   1
  *||--|||*||||||||||||*||||
targets:1867   CAUAAUUCAACAUCGGUUGUCAUAAU   1892

2.5 PREDICTED: Glycine max protein NRT1/ PTR FAMILY 7.3-like (LOC100803433), transcript variant X1, mRNA protein NRT1/ PTR FAMILY 7.3-like(LOC100803433) coding protein psRNATarget
XM_014771284.1
ncRNA:24   CUA--AAGAUGUAGCCAACAGGAUUA   1
  *||--|||*||||||||||||*||||
targets:1931   CAUAAUUCAACAUCGGUUGUCAUAAU   1956

2.5 PREDICTED: Glycine max protein NRT1/ PTR FAMILY 7.3-like (LOC100803433), transcript variant X2, mRNA protein NRT1/ PTR FAMILY 7.3-like(LOC100803433) coding protein psRNATarget