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BaseInfo

ncRNA ID novel_gma_miR1291
Species Glycine max
Class miRNA
Genome position Chr19:34835381-34835473 [-]
Reference genome Glycine_max_v2.0
Source SRR1451642;SRR1295521
Length 24
Mature sequence(if miRNA) 70 - AGUAGUUUACGGAUCAUGUUGAUC - 93
Stem-loop(if miRNA) --                          U       U    A   A
  AGUAGUUUACGGAUCAUGUUGAUCCG AAGCAUC UCCG AUC A
  |||||||||||||||||||||||||| ||||||| |||| ||| G
  UCAUUAAAUGCUUAGUACAACUAGGC UUCGUAG AGGU UAG U
GC                          U       U    C   U
Stem-loop sequence AGUAGUUUACGGAUCAUGUUGAUCCGUAAGCAUCUUCCGAAUCAAGUUGAUCUGGAUGAUGCUUUCGGAUCAACAUGAUUCGUAAAUUACUCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT094527.1
ncRNA:24   CUAGUUGUACUAGGCAUUUGAUGA   1
  ||*|*|||||||||*||||||||*
targets:141   GACCUACAUGAUCCUUAAACUACC   164

2.5 Soybean clone JCVI-FLGm-14B6 unknown mRNA NA coding protein psRNATarget
XM_014774695.1
ncRNA:24   CUAGUUGUACUAGGCAUUUGAUGA   1
  ||*|*|||||||||*||||||||*
targets:158   GACCUACAUGAUCCUUAAACUACC   181

2.5 PREDICTED: Glycine max putative GPI-anchor transamidase (LOC100805764), transcript variant X2, mRNA putative GPI-anchor transamidase(LOC100805764) coding protein psRNATarget
XM_006578409.2
ncRNA:24   CUAGUUGUACUAGGCAUUUGAUGA   1
  ||*|*|||||||||*||||||||*
targets:158   GACCUACAUGAUCCUUAAACUACC   181

2.5 PREDICTED: Glycine max putative GPI-anchor transamidase (LOC100805764), transcript variant X1, mRNA putative GPI-anchor transamidase(LOC100805764) coding protein psRNATarget