ncRNA ID | novel_gma_miR1291 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr19:34835381-34835473 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451642;SRR1295521 |
Length | 24 |
Mature sequence(if miRNA) | 70 - AGUAGUUUACGGAUCAUGUUGAUC - 93 |
Stem-loop(if miRNA) |
--                          U       U    A   A   AGUAGUUUACGGAUCAUGUUGAUCCG AAGCAUC UCCG AUC A   |||||||||||||||||||||||||| ||||||| |||| ||| G   UCAUUAAAUGCUUAGUACAACUAGGC UUCGUAG AGGU UAG U GC                          U       U    C   U |
Stem-loop sequence | AGUAGUUUACGGAUCAUGUUGAUCCGUAAGCAUCUUCCGAAUCAAGUUGAUCUGGAUGAUGCUUUCGGAUCAACAUGAUUCGUAAAUUACUCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT094527.1 |
|
2.5 | Soybean clone JCVI-FLGm-14B6 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
XM_014774695.1 |
|
2.5 | PREDICTED: Glycine max putative GPI-anchor transamidase (LOC100805764), transcript variant X2, mRNA | putative GPI-anchor transamidase(LOC100805764) | coding protein | psRNATarget | |||||||||
XM_006578409.2 |
|
2.5 | PREDICTED: Glycine max putative GPI-anchor transamidase (LOC100805764), transcript variant X1, mRNA | putative GPI-anchor transamidase(LOC100805764) | coding protein | psRNATarget |