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BaseInfo

ncRNA ID	novel_gma_miR1289
Species	Glycine max
Class	miRNA
Genome position	Chr19:46344034-46344112 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451642;SRR1451620
Length	21
Mature sequence(if miRNA)	59 - AAAUCAACUUAUGCACUUCAA - 79
Stem-loop(if miRNA)	--                  C        GAUAUGAUAA   AAAUCAACUUAUGCACUU AACUUUUG          A   |||||||||||||||||| ||||||||          U   UUUAGUUGAGUACGUGAA UUGAAAAC          G AU                  U        AUCUUCGAGA
Stem-loop sequence	AAAUCAACUUAUGCACUUCAACUUUUGGAUAUGAUAAAUGAGAGCUUCUACAAAAGUUUAAGUGCAUGAGUUGAUUUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT095764.1	ncRNA:21   AACUUCACGUAUUCAACUAAA   1   **|||||*||||||||||||| targets:1059   CCGAAGUACAUAAGUUGAUUU   1079 Target Full Sequence	1.0	Soybean clone JCVI-FLGm-15K19 unknown mRNA	NA	coding protein	psRNATarget
XM_003518975.3	ncRNA:21   AACUUCACGUAUUCAACUAAA   1   **|||||*||||||||||||| targets:1109   CCGAAGUACAUAAGUUGAUUU   1129 Target Full Sequence	1.0	PREDICTED: Glycine max binding partner of ACD11 1 (LOC100805907), transcript variant X3, mRNA	binding partner of ACD11 1(LOC100805907)	coding protein	psRNATarget
XM_006574485.2	ncRNA:21   AACUUCACGUAUUCAACUAAA   1   **|||||*||||||||||||| targets:1130   CCGAAGUACAUAAGUUGAUUU   1150 Target Full Sequence	1.0	PREDICTED: Glycine max binding partner of ACD11 1 (LOC100805907), transcript variant X2, mRNA	binding partner of ACD11 1(LOC100805907)	coding protein	psRNATarget
XM_006574484.2	ncRNA:21   AACUUCACGUAUUCAACUAAA   1   **|||||*||||||||||||| targets:1142   CCGAAGUACAUAAGUUGAUUU   1162 Target Full Sequence	1.0	PREDICTED: Glycine max binding partner of ACD11 1 (LOC100805907), transcript variant X1, mRNA	binding partner of ACD11 1(LOC100805907)	coding protein	psRNATarget
XM_014775561.1	ncRNA:21   AACUUCACGUAUUCAACUAAA   1   ||||=||*||||||||||||| targets:1823   UUGAGGUACAUAAGUUGAUUU   1843 Target Full Sequence	2.0	PREDICTED: Glycine max protein IQ-DOMAIN 1-like (LOC100780294), transcript variant X4, mRNA	protein IQ-DOMAIN 1-like(LOC100780294)	coding protein	psRNATarget
XM_006579763.2	ncRNA:21   AACUUCACGUAUUCAACUAAA   1   ||||=||*||||||||||||| targets:1869   UUGAGGUACAUAAGUUGAUUU   1889 Target Full Sequence	2.0	PREDICTED: Glycine max protein IQ-DOMAIN 1-like (LOC100780294), transcript variant X2, mRNA	protein IQ-DOMAIN 1-like(LOC100780294)	coding protein	psRNATarget
XM_006579764.2	ncRNA:21   AACUUCACGUAUUCAACUAAA   1   ||||=||*||||||||||||| targets:1876   UUGAGGUACAUAAGUUGAUUU   1896 Target Full Sequence	2.0	PREDICTED: Glycine max protein IQ-DOMAIN 1-like (LOC100780294), transcript variant X3, mRNA	protein IQ-DOMAIN 1-like(LOC100780294)	coding protein	psRNATarget
XM_014775560.1	ncRNA:21   AACUUCACGUAUUCAACUAAA   1   ||||=||*||||||||||||| targets:2311   UUGAGGUACAUAAGUUGAUUU   2331 Target Full Sequence	2.0	PREDICTED: Glycine max protein IQ-DOMAIN 1-like (LOC100780294), transcript variant X1, mRNA	protein IQ-DOMAIN 1-like(LOC100780294)	coding protein	psRNATarget
XM_006595003.2	ncRNA:21   AACUUCACGUAUUCAACUAAA   1   ||||=*||||||||||||||| targets:4387   UUGAGCUGCAUAAGUUGAUUU   4407 Target Full Sequence	2.0	PREDICTED: Glycine max flowering time control protein FPA-like (LOC100810601), transcript variant X2, mRNA	flowering time control protein FPA-like(LOC100810601)	coding protein	psRNATarget
XM_003538956.3	ncRNA:21   AACUUCACGUAUUCAACUAAA   1   ||||*||*||||||||||||| targets:211   UUGAUGUCCAUAAGUUGAUUU   231 Target Full Sequence	2.0	PREDICTED: Glycine max TATA box-binding protein-associated factor RNA polymerase I subunit B (LOC100789168), mRNA	TATA box-binding protein-associated factor RNA polymerase I subunit B(LOC100789168)	coding protein	psRNATarget
XM_006602635.2	ncRNA:21   AACUUCACGUAUUCAACUAAA   1   |||||||*||||||*|||||| targets:240   UUGAAGUACAUAAGGUGAUUU   260 Target Full Sequence	2.5	PREDICTED: Glycine max prosaposin-like (LOC100802366), transcript variant X1, mRNA	prosaposin-like(LOC100802366)	coding protein	psRNATarget
XM_006582823.2	ncRNA:21   AACUUCACGUAUUCAACUAAA   1   |||||||*|||||*||||||| targets:1016   UUGAAGUACAUAAAUUGAUUU   1036 Target Full Sequence	2.5	PREDICTED: Glycine max phosphopantothenoylcysteine decarboxylase-like (LOC100778368), transcript variant X2, mRNA	phosphopantothenoylcysteine decarboxylase-like(LOC100778368)	coding protein	psRNATarget
XM_014775014.1	ncRNA:21   AACUUCACGUAUUCAACUAAA   1   *|*|||||||*|||||||||| targets:3460   GUAAAGUGCAGAAGUUGAUUU   3480 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100799545 (LOC100799545), transcript variant X3, mRNA	uncharacterized LOC100799545(LOC100799545)	coding protein	psRNATarget