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BaseInfo

ncRNA ID	novel_gma_miR1287
Species	Glycine max
Class	miRNA
Genome position	Chr11:12182001-12182103 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1294479
Length	21
Mature sequence(if miRNA)	83 - UUUUAAAGAUGUUGCUGAGGU - 103
Stem-loop(if miRNA)	-UUUUA         C            CA       -----------      CCU       AAGAUGUUG UGAGGUAAGCAC  UCUUAAA           AUGCUU   U       ||||||||| ||||||||||||  |||||||           ||||||       UUCUACAAC ACUCCAUUCGUG  AGAAUUU           UGCGGA   U GUAAAA         A            -C       ACCACAGUCGU      AAC
Stem-loop sequence	UUUUAAAGAUGUUGCUGAGGUAAGCACCAUCUUAAAAUGCUUCCUUUCAAAGGCGUUGCUGACACCAUUUAAGACGUGCUUACCUCAACAACAUCUUAAAAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001250562.1	ncRNA:21   UGGAGUCGUUGUAGAAAUUUU   1   *=||||||||||*|||||||* targets:1073   UUCUCAGCAACAGCUUUAAAU   1093 Target Full Sequence	2.5	Glycine max serine hydroxymethyltransferase 3 (LOC100499634), mRNA	serine hydroxymethyltransferase 3(LOC100499634)	coding protein	psRNATarget
EU912421.1	ncRNA:21   UGGAGUCGUUGUAGAAAUUUU   1   *=||||||||||*|||||||* targets:1073   UUCUCAGCAACAGCUUUAAAU   1093 Target Full Sequence	2.5	Glycine max serine hydroxymethyltransferase 3 mRNA, complete cds	NA	coding protein	psRNATarget
AK243785.1	ncRNA:21   UGGAGUCGUUGUAGAAAUUUU   1   *=||||||||||*|||||||* targets:1098   UUCUCAGCAACAGCUUUAAAU   1118 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-01-E02	NA	coding protein	psRNATarget
AK243929.1	ncRNA:21   UGGAGUCGUUGUAGAAAUUUU   1   *=||||||||||*|||||||* targets:1098   UUCUCAGCAACAGCUUUAAAU   1118 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-01-K06	NA	coding protein	psRNATarget
XM_006584436.2	ncRNA:21   UGGAGUCGUUGUAGAAAUUUU   1   *=||||||||||*|||||||* targets:1159   UUCUCAGCAACAGCUUUAAAU   1179 Target Full Sequence	2.5	PREDICTED: Glycine max serine hydroxymethyltransferase 3 (LOC100499634), transcript variant X1, mRNA	serine hydroxymethyltransferase 3(LOC100499634)	coding protein	psRNATarget
AK285311.1	ncRNA:21   UGGAGUCGUUGUAGAAAUUUU   1   *=||||||||||*|||||||* targets:1126   UUCUCAGCAACAGCUUUAAAU   1146 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-07-D11	NA	coding protein	psRNATarget