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BaseInfo

ncRNA ID novel_gma_miR1285
Species Glycine max
Class miRNA
Genome position Chr18:1664136-1664245 [-]
Reference genome Glycine_max_v2.0
Source SRR1451642;SRR1451615
Length 24
Mature sequence(if miRNA) 87 - AUUGAAUUGUGACUCCGUUGUGUU - 110
Stem-loop(if miRNA) --            C             ---------------AGU      CGUACAAUAA
  AUUGAAUUGUGA UCCGUUGUGUUAU                  UUUUAU          A
  |||||||||||| |||||||||||||                  ||||||          A
  UGAUUUAGCAUU AGGUAACAUAAUG                  AAUGUU          U
GU            A             GACUCCACGUUUAAACAC      GUAUUAACAU
Stem-loop sequence AUUGAAUUGUGACUCCGUUGUGUUAUAGUUUUUAUCGUACAAUAAAAUUACAAUUAUGUUGUAACACAAAUUUGCACCUCAGGUAAUACAAUGGAAUUACGAUUUAGUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014766272.1
ncRNA:24   UUGUGUUGCCUCAGUGUUAAGUUA   1
  =*|*||||*||||||||||||||*
targets:5774   GUCUCAACAGAGUCACAAUUCAAA   5797

2.0 PREDICTED: Glycine max uncharacterized LOC100801910 (LOC100801910), mRNA uncharacterized LOC100801910(LOC100801910) coding protein psRNATarget