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BaseInfo

ncRNA ID novel_gma_miR1284
Species Glycine max
Class miRNA
Genome position Chr17:6967795-6967934 [+]
Reference genome Glycine_max_v2.0
Source SRR1451642
Length 24
Mature sequence(if miRNA) 1 - AAGUGAUGACGUGGUAGACAGAGU - 24
Stem-loop(if miRNA) --             GU    A A       AU     C  AUA    CAU    C  A   UCACCUCA
  AAGUGAUGACGUG  AGAC G GUGUCAC  CAUCA AC   GUCA   ACAU UC UUG        A
  |||||||||||||  |||| | |||||||  ||||| ||   ||||   |||| || |||
  UUCGCUACUGCAC  UUUG C CACAGUG  GUAGU UG   CAGU   UGUG AG AAC        C
AA             UG    A C       CG     A  GAG    AGC    C  A   UUUCCCCC
Stem-loop sequence AAGUGAUGACGUGGUAGACAGAGUGUCACAUCAUCACACAUAGUCACAUACAUCUCAUUGUCACCUCAACCCCCCUUUCAAAGACGUGUCGAUGACGAGGUAUGAUGGCGUGACACCCAGUUUGUCACGUCAUCGCUUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014766262.1
ncRNA:24   UGAGACAGAUGGUGCAGUAGUGAA   1
  |||||||=||=|||||||||||||
targets:758   ACUCUGUUUAUCACGUCAUCACUU   781

2.0 PREDICTED: Glycine max uncharacterized LOC100804377 (LOC100804377), mRNA uncharacterized LOC100804377(LOC100804377) coding protein psRNATarget