Search result

BaseInfo

ncRNA ID osa_circ_039943
Species Oryza sativa
Class circRNA
Genome position 9:20733395-20736535[-]
Reference genome RGAPv7
Source PlantcircBase
Method SMALT and Segemehl/find_circ
Type exonic
Splice junction sequence CTAGCATTATGCAGTGACAGGGCCCTCTGCATTGCTACGTCCATTGAGCTGCTCTGGGTGGATCTTCTTCCCCAACATCTTCCTCATGACCTACTTATTTTCTCAACAGTACCGACCTTCCAGCGGACCCATATTTGTGATGCAATGATATGTCATCCAGTTCCATCCGGTTTGGCGCATTATGAATGACCAGAATAATA
Tissues leaf and panicle/root
Exon boundary No-No
Splicing signals AC-CT
circRNA sequence NA
Genomic sequence CTAGCATTATGCAGTGACAGGGCCCTCTGCATTGCTACGTCCATTGAGCTGCTCTGGGTGGATCTTCTTCCCCAACATCTTCCTCATGACCTACTTATTTTACAGATGACAAAAACCAAAAAGGTGCATTCCAGGTCAGTGATCATTTACCACTAAAGACTGGCTAGATGCATAATGCTTACTCCAGTTGTAGCTATATGGTAAAACATATGTGTAAGATGTGGCGCACTGACCATGGAACAAAGTGTAATAAATTCCAGACTAGTAAAATATAATGTAACAAGGCTTAACAAATAAAGCAGAGACGAAGAAAACCATACTCGACTTAATTTTCTTGTAGCCTTCAGCGGCTTTGACGTTGGTTTTGTTGGCTTCTTGTGATGCATCTTCTCCATGCACGACGTAGGCTTTGAAGTGGATGCCCCAGCAACAATGACGATTTTCGGGTAACACTTATCCTCTGCATCACTTGATGAGAATGCTTCTGCAGCAAATAGATCGGCAAGTGTAGTTCTCACTTTCTCCACCTTCTCTAACATCAGAAGTGGTCGTTCCTGGATGTTAGGAACATCTTCCACTTCCATGCCATGCATTAGGATTTCCTCCTTCACAAAGCACATGAAGTTGTCTTCTTTCATCGATGATGAGTGCATCTTGGCAGGCTCAAGAGCAGATGCCGGTTCACTTGGTGCTGTAACTGGTGTGTCCTGTTTAGCCTCAGCCTTTTCTTCTTCGCACTTCTCTTGTTCCACTTTCTCATCACACATGATGATGGGCTCATCTTGTTCAATACAGGACTCAGGACAGAGTGAGTTTACATTGTGGCCCAGCGTGCCAATTGCAAGTATACCATTAATAAGCACATCACGGAGCAGCAGGGCCTCAGTGTCTTGCTCAGTCACACTTGCACGCAGAGAGTCTTCCTTCTCTTCCATGGCTACTCCATCAGGAAAAAAAATAGAAGAGAAGAAACAAGAGTTGACAACATGAGAACAACAAAACATGTGGTACATAAAAGAGAGATATCCTGGTATCCTTACCCTTGTTCTCATTGATGGTGCAATACTCGACATTAGAATGCTTCTTCCGATTCAGCCAATTGAACACCTGGTAGTGCCATAAAAACATAAATCACCAGTAATCTCATTAGATATAAGAACAGTGAGTTGAATCCAACGCACTTGTTTAAGAGAGACAGAAACTGCAAAGACCTGTACTTTACAGCATACACTATACACGGACAAATGGTGTATCAGCATGAACTAACTGTGTACCTTTAGAGCCATCTCTCTAGAACCAATATGAAACCAGAAGAGAAAGCCAGACAGTAGCTCAGATCCTCAAATGCATGGCATGGTTTTATAAAAAGACACTAGTCTCATGATTGAATGGTCCAGGAGACAGAAGAATGGACTTTTGGTTGCAACTGGCTTGGCCTGACTCACTGAAGTAAATTCTTTCACCAAGGTAGATAAGCACACTTTCGACAGCCATATGCTACATTCTGTTCAAAGTCAGCAAACATCAGTCACTAATCACACCAGGTAGGGAATGATTCAGAAAAATTCCAACCACCGAAATGTGGCCTATTACATGTGCAAGTTGGGGCCCCACTGACAGAACGGATCAGGTCAAATTGGTGTGTAATATTGGGCAAACTTATATCAAATAGCATGGAAGAGTATGTGCATTCCCATATAGACATGATTAGACCGAGTGCCAAGATTTGTTCCAGATTAAGCAAGTATCAAGACTCAGGCTTAAATTGAAAGCCATTACTTTATGAGATACTCGACATCTGTGCAAATATGGTCATTATTCCAGCTTTCCAAAGAGATGGAATTCTCAATCTGTTCTTGCTCTAAAGATTCTTGAGCACTGCAGGCCTGTAGCACCAAGTTTATCATTCAACAGTAAGTTGCACATGCTTATTTGCTCTTGGTGTCTAGTGATCTTGCACATTATCCATAGCAGACTAGTCACTGACAGTGGGCTGCGATTTCATAGGCCAGTAGCAGCTGGCAACAGGCAGTAGCCTGCATGTTTGCAATTAACAGCAATGTATTATGGTATCTAATGCCATCAGCAAGTAGTGACTCCAGGTGTACAGAGTAACTATTAGCTGGCAGAGGGACAGGCATGCAATTTAATCCTGTAGTAGCAAAAGTTCAGTTGAAGGTTCCCTGTATCTGCTTACTAATATTTAAACTTTTAGATGCCTATATCATTAGACCATGTTGTCTACACCAAAGACCATTAGTTCAATCCTGTTTTATTTGTATAAAAGTTTCTCATTTGATTACTTCGAATCAATTTTGTAGGCCAACTGGATGATACTGAGTCAGAATCACAAGCTTGACACTCCATCCCTACGTCCTAGACTAATGAACCACAAGAATTTGTTAATGATTTCTAGACCTTCATCACATATTCCTAATATGTTCAAAATATTGTTTAGGAACTAAAATGTTCAAAACTACATTCTTTCTTACTCAAGCAAGCAAATCCAGACGAGCAATTCAACACATCAGTAAAGACAGCTGGCTGAAATAGCTTGGAAAATTCTAGCGGACTGCTTTGGAACAAAATATGTTCTAGATATAATAACAGGATGCAAACATAGAAGTGGTTTTCATTAGTTCTCTCATCCTTGATTAGCTCCCTACATACAATGTATCCAAAGATGTTGCTATGACAGACCTCGTGCAGTTGTTTGTGCCAGAACTAAAGCACCAGCCAACACCAACAAACCAGTGGGGATGAGCAAAATAATGCTGGGCTGATCATGTAATCATCTCAATAACCTAATAAAAATAGACTATTGAGAAGGTAACCTTGTCCAGATGATGGTTCATGAAGCTCTTTCACTGCACAATCCCCCACCACCATCATTCAGTATGCAAAAAAGACCTGTGCACTTCATCTTCTTCATGACACCGAAAGCTTCAACAGATCAAGCTGTGTCCAGTTCCATCTGGCTTGACGGATGAAGAATGACAGCTGAGGCTCACAAGAACAGAAATACATGCTCTGCATCCACCTCTCAACAGTACCGACCTTCCAGCGGACCCATATTTGTGATGCAATGATATGTCATCCAGTTCCATCCGGTTTGGCGCATTATGAATGACCAGAATAATA