Search result

BaseInfo

ncRNA ID	osa_circ_039932
Species	Oryza sativa
Class	circRNA
Genome position	9:20625287-20632721[+/+]
Reference genome	RGAPv7
Source	PlantcircBase
Method	find_circ/NA
Type	exonic
Splice junction sequence	TGATCACCAGTTACTACTAAGGAAAGGTGTTCGGTGATGCCACTAAGATCATGGTTCCAGGGACGATGCAAAGGCAATGGAACATGTTTCACTGAGGTTCAATCCCCTCTCTGTTTTGCAGGCTGGAAGCTGTAACCTCTTGTGTTTTGTTGATTTTTCATCTCCTCCTGAAGCTCGTGCTGCTCTGGAGACTCTGCAAG
Tissues	root/seed
Exon boundary	Yes-Yes
Splicing signals	AG-GT
circRNA sequence	NA
Genomic sequence	TGATCACCAGTTACTACTAAGGAAAGGTGTTCGGTGATGCCACTAAGATCATGGTTCCAGGGACGATGCAAAGGCAATGGAACATGTTTCACTGAGGTTCTCATTCAGGGCAAAGGGGAATTGCTCTTCGGAGCTATGTGAATTTGGTAAGTGGTACCCTTCTTAGAGTGGTCTATTCCATGGTGCAACAGCTTATGCATCATACAGATTTTGGAATGGTTCTTATGTTATGATCGTTTTGATGTACTCCATTCATCCTAAACATATTTAAGCTTGTCTATCTACTTTTCTTTTTTCAGTTTGGCAGAAACACTGCTTCGTATGGTTGCAAGTGTATTCTAGCGTGAATTGTATTTTCTCAAGGTCTAAACTGTAACTGAATTTAAATTGTAATGCTTGGAGTGAATGTCTTAAGTTAAAAACTTTTGCTTTTTGTTTGAGTTAAGTACTCCCTTTGTTTCATATTATAAGTCGCTTTTTTTATAGTCAAACATCTTTAGGTTTAGTTAAGTTTATAGAAAAAATTAGCAATATCTATTCCACCAAATTAATTTCATTATATATAACATTGTATATTTGATAATATGTTTGTGTTGTATTGAAAATGTTGTTATATTTTTCTGTAAACTTAGACAAACTTAAAAAAAGAGTTGATTAGGAAAAATGTCAAAACGAATGACTTATGGTATGAAACGCAACGCGGGGAGTATATGGCTATGGTACAAAGACATTGTAACTACAGAAGTATATTGATTTGCCCCTCTTTTCTACTTCGAGCGGATGAGATGAAGTTTACTCCGCTCCACGAAGAGTTGATTTTTACAAAATTCCGGACAAATTAGCATCATGATGAAAAGATGTCGAAGCCATCCAATAAGCCCCTTGATTGGTTGCGACCTTTCGTTAATTGCTTGGTGGACCCCTTGAAAATTCAACTTTTTATGGGACAGATTTCAGTTACTGTCGAATTCGTTTCAACTCGGACCTGCTTCGTTAATCATCTTATGCATATGCTTAAACTTGTAAGCAAATTTGAATTTGGCTCATATGCTCAAGTTTTGGAATACCGTAAACGAGGCACCATTTTACTTCTTACTAGTAGATTTGCTCGAGGCACCATTGTACTTCTTACCATATGTATCTTTCATGGCCTTGTTAGTATTTTAGTGTGAATGAATGCCGCAGCAAATAGCCAAGGTCCTTTTTAAAGAACATATATTAACAGGTTACTGATCTACGGAATCAACGGACATATTAGGGATCGGGAGTGTTTGAATTAGGGAGCACAAAATTACACCGACGCCATATGTCAATGATAGAGGGTTAAATATATCAGTGATAGGCAGTTGTTGTGGCAGATTTACTATCACCGACTACCAACATTTTGTCATCACCACCACCAACAATTAGAGCAAGGTCAATAGTGCAGCCCACTACTAGCTCTAAATCATCTTAGCTAATGTAATAGCCAATTCATACAATAGTTGCTTACTATACTATTTATATCTGGTCTCACCTATCATACACATATTACATCTTGGAGTTCGTACTGCAGCTGGCTACAGTTCTGTAGCCCGCTGCCCTTCTCTCTCTTCCTTTATCTCTTTAAAATATGTTTATAGCTGGCTTATAGCTTGCTATTGTACCTGCTGTTATAGCTGTGTAGATTAGTTTTGGCAAATTTTGCCACAGGATATTGTGACTTTGCAGTTTTAGCCGTAGGACACCGCGCGAAGTGACTTTTGGAGGAATACACTCTCAAAATGTGGTTATTTGCTGGTGGACACCGCACCCATTAAATTAGTAATTTCCGGTTGAATAGGAGAGATAAATTGTGTGAAATTTCTAAAATGTCCTTTGGCCCACATGTCAGGTCTTTCTTCTCTCTATCCCCTCCTTCCACACTGCAATGGCTAGCGCTTCTCCGTCCTCTATGTCAACGCGAAGGAGATGGCTCGTGCTGGGCTAACCCACAAGCAGGAATCCGAAGAGGGAGGCCAGCTGATTGGAGTCGTACGCCGGCGAGGGAGGGAGCGCCACGCGCTGGGTGACGCCGTGGGGTCAGGGAGCGGAGCAGAGAAGAGCTGGGCGTGGGGGCGGGGCGGTGGCAGTCGTGTACGGCGGCGGCGGCAGTCGTGTACGGCGGCGGCGGCGGCCTTCTTCTGCTGTACCTGGTGCCGCATAGCCACGCCAGCCGTTGCTCCGCCATCGCGCCAGCCGCCGCTCCTGCACGAGTGCGCCACCGCGTCGCGCGCTGCCCTGCGATGCATCGCCGGCCGCCCGCATCGCGCCGCACAGTTGCCGCGAGCCGCGCCGTCCACTACTCCACCTTCGCGCTAGCCGCCGCTCCTGCACAAGTGCGCCTAATGCCCTGTGCCGCGGGCTGCTCGTATCGCCCAATGCCCTTCACCGGCCGCTCGCATCGCCCGCTGCCCTATGCCGAGCAGCCACGCCGGTCGTTGCTCCGCCATCGCGCCGACCGCCGCTCCTGCACGAGTGCGTCCCTGCGTCGCGCGCCGGCCGCCTGCATCACGCCGCACGGTCGCCGCAAGCCGCGCCAGCCGCTGCTCCACCTTCGCGCTGGCCGCTGCTCCTAGACGAGTGTGCCATCGCATCACCCACCGCCCTCTGTCGCGTCGCCAGTCGCCTGCATCGCGTGCCGCGTTGCGCCGCACGGTCATCGCGAGCCGCGCCATCGAGGGAGAGAGAGGAAGAAGATAGGAAGAGAAAGAGGAATAAGGGGCAATTTGGTAAGTCATGTAAAAAAGTGGAGCCATCTCGTCTACTCAGCACCGAAATCATTAATTTAATGGGTGCGGTGTCCACCATCAAATAACCACATTTTGAGAGTGTTTTCCCCAAAAAATTACTTCGCGCGATGTCCTACAGCTAAAACCACAAAGTCACGATGTCATGTGGCAAAATTTGCCATTAGTTTTTCAGGCTTTTGCTTGGCCGGCTCAACATCCAACGCTCCGATGACAACTGTGGCTGAAGGCAAGGCCCAGCCCTATAGACGCTGGCCTCCACCATGTTCCAAAGAAAGGCCCGGCCCAAAACCAACTGTGGCTGAAGGCAAGGCCCAGCCCTATAGGCGCAGGCCTCCACCATGTTCCAAAGAAAGGCCCGGCCCAATACCCAGCGAATCCCATGCAAAAGGAAAAAAGTTATACCTGACTTCCCTCGTCTTGTCGCTGAATTACAAAATCATCCCTGAACCAAAAAACGAGATATATAGCATCTCTCAACTTAGAAAACTAGGCTCTCTAGGTCTTTAGGTGATTTTGTCTTTGGTTTTTACCGACGTGATAGCTGAGTCAGTATTGGACCCCATATGAGCCATACATGTTAGTGACTACTTCCCTTCCTCTCTCTCTCCACCTCTCTTCATCTCTTCTCCAGTCCTCTCCATCTGAGGTGTGCAACGGTCGACGAGGAGAAGGGCCAGCGCGGCGAGCGCGACCGGCGACGGGCGGGGAGAACTGGAGGCGCGCGGTGCCCGACGGTGGCCCTCGCTGACAGCGACGACGCTTGTTGGTGACGACGAGCAAGGAGAAGAACGGTGGCCGGTGGAGAGGAGCTAGGAGTCAGCAGCGTCACTAAGCTTGACCGGTAATGGCGAGGAAAGCGGGAGCCCATCCCCCCAACGACGGTGGGCTCACGAAGGATGTCTGGGCAGGGGTGCCGTCAGCGAGAGCTTGATGGAGCCGGAGAAGAGGGGGCGAAGATCTAGGAGGGGAAGTAGAGAGGCCCGCTGCCGCCGCCAATGTGTAGCTCCTCTCCATCGGTCACTACTCGTAGCGGCAAGGAGGAGGAGGAGTGGCCTAAGGTGTTGGATATCGGGCGGCGACGAGCAAGAGGGAGGAGTAGTTTGGCGGCGACATCAGTGTGGTTGGCTGGTCGTTGCGTGGCCACCGCCTCCTCCCGAGCTGCTTTGCCTAGCGACCAGCCCCGGTGATCTCTTCCTGTGCCGCCTCTCCCCCGCCACCTCCGCGACCGGCTGACTACCCGTGCCGGTATCTACCTCGACGACCCTTTCCCATGCCGCCTCTCCGCCGCTCCCCGTTGCTACGACCGGCTGCCTCGTCACGCCGGCATCTGTCGCTCTGCACCGGCCTGATGTGAGAACGGGGAGAATGAGAAGAGTTTATGTCATTGACATGTAGGTCCCACGTTAAGTCAGCTACCACGTCGGCCAAAACCGGAGTCAATGCCGCCATAGGAGGGACCTCAGGTATACTTTTCCCCACGCAAAAACTACCCAGCCCATCATCACGGCCCATGCAGGCCCGACACGCTTGTCGAAGGCAGCCCACACTGCACAACTTCTCTCTCCCTCCAGCCGTCACGCGCGCCGCGCCGCGCCGTAGCGCGCGTCCACACCAGCGCGGCGCGGCGCAACGCGGTGCCCGCGCGCCGCTTGCTCCCCCCTCCTCGCGCTCCACGCGCGCCCGCGCTCGCCGCCAGCGCGCGCTGCCCCGGAGCGCGACGACAGCTGTGTGGGGGGCAGCGACAGCGCCACTGGCGTCAGCACCAGTAACCGAAGCCGCGCTCGCTGGCTACAAAACACGCGCCCCCTCCTCCCCTCACCGCGGCTGCGCACGCATTCCCCATTCCCCATTCCCCTATCTCTCGAACCCTAGCCCCTAGTCCCCTCCCGAACCCTAGCCCCCACCGCGCCGCCGCCGCCGCCCTCCCGATCGCGATGGCCGCCGAGAGCTACTGGCAGTACCAGTACGCCGCCGTCGACCCGCGCCAGCAGGCGCCGGCGCCGGTGCCTGTGCCCACGCCCGCGCTCATGTGGCAGCAGCAGCAGCAGCAGGCGGGGTATCAGCCCGCCGTGGCGCCGGTCGCGCCCCCGATGGCTGCTCCGCCACTGCCCGCCGGCCCCCCGCCGTCGTTCAAGCGCCAGCGCCCGGAGTACTTCGGTTCGTGCTCGCCCACACATTCCTCCTCTTCTTGATTGTTAATTTTGTGTTGCCTGCTAGATTAGTCGTAAGAAAGTATAGGTAGCTTTGTTGTGGGTATCCATGGGGTTTAGGGCTTTAGGCTATAGAACATATAGATGATGATAGTGGAAGCTAGTCTTTTTTTATAAGCAGATCTTGTTGTCCTGAACTTTTGGGGTTCAGGGCGAGAAAAAATCAGAGGCCTTTTATTTGAATGTATCATCATCAGTAATCTTAATAAATTGCAAATATCCCTCATGTTTGAATTACAGATCCAGATATTATCAGTTATAAGTCTGAAACTCTGAATAATAGGGAGCAGAATCACCTGGATTTTTGTGATCTTGTAGAAACCGAAATATCATCAAGAACTCGTGGAAGCCAATCTCCTCAAGGGTATAATCTGTTAGAGGACTCCTAAAAAGGGAAAACACACACACACACCAACTATAGAAAATCAGTGCAAAGCTATGAGATAAACCAACCAACCACTCAACTCAAGGAGATCTTGCTGACTAACTAGAGAAACTAATTATTATGAACAACTCACAGGAATGAGGAATTCATAACCAATCAACTCTAATGGCAATCTTTAGAACCAAAAGAAATCAAAGTTCCATCTTTTTTTTGTCAATCTTCTTTGGGGTGTTATTCAACCCTGAAGCAAAGGAGTGAGATCTAAAAAACTTAAAGAGTACGACATATGCAGTGGCTGAATGACGGGATTACATGCAGCAAATGACACACTTAATTAGGCTTTAGTCATGCTAGCTAACCCAGCGTAGTTTCGGGAATAGATAAGGGTCGAGGGGAATGAGATAGCTTCGATGCTTCGTGACCTGCGCAGACTGATATGCTTGTTGGACATCTGCTAATGAGGCTTGGGCTTCCAAACAATACGTGTGTGGTCTGGGGCCCTGACTGCCCTGACTCAGGGCCGGCCTTGTGTTTTCCCTGCCACGCTGTACTATTAACCTGTCCAAGGAAATGGTAGGAGAAGTTGCAGGCTTGTAGTTTTGAATTGTTCCAATGGTAGATGTTTGTTTGAAATGAATACATAAAAATGAAACCATTCCTCATTTCCTGATAAAGCCTCAATGTCGTAAGATGGGAACTAGTAATTTTCATATGTGAATCTACAAGATCATATTGATTCTTTGTTTTCTTTAAAGTTAGATGGTGTAGCATGGTTTATATGATATGTTAGATTGAATTAATCTCTGGTTAGGCTAATATTTCACTATCATTGGTAGGCTCTAGGCAAAAGGTTTCGGCTTCTATTATAGAGTAGTCGGTCTGACTATTTTGATGGCTAAATGGTTTGTAAATTCTGAAATCTAAAACAAGAGAAAAAAAAAGGAATTTGTTGTGTAAAAAGGTTCTAATAATCTCTACAAAGGAATTTGCTGCTTGCATGCCGTTACGTTGTTTGCCGCCAATTCTGAATGCATCTATCATCACAACAATAAAGTTTAGTCCTTTTTTAGTATCATTTTATTGGGAAAATGATTGCTTGCTATGCACAGCTACCTGAAACTATGTATCAGGATTGCCTACCTGCACATAGATTTGGCGGCTTTTTAGTTGTTAGATAATGTTGTAATTACCGCACATCATTAATTCTTCACATGTTTGCTTCTATTGCAACCCCATTTTTGTCATAGCTTGCTTCTTAAATGGACAGGGAAAAAATATTGACGAGACTGTTCAGTAGTTTCTTCCTAATGTATTTTCTCCAAGTGAGATGTTCATTTGTTTCAGTCAAAAAAAAAAGATGTGCATTTGTATATTTTAACACTTTACACTTTGTTTGCAGACATGCCTTCTGGACAGGGAAACAGCCTCTTCCACGAAGCAATGAGCCCCCATTATGTCCATCGCTTGAACAATCAGGTATTATATCAATTATAAGCTTGTTAATTTGAGGATAGCAACTTTCTTACTAACATAGTGCTGGTTGCAGATGTCCTATGCTGCTGGTGCTAACCAAAGTGCTATTCCACTTGGTGGGATGGCCACATATTCAGCAGGCATGGACAGTGGAAACCATGGCGCTACAATAACTGAATCAAGAACTCTCTATGTGGAAGGACTACCTTCGAACTGCACAAAGAGAGAGGTTGCACGTATCCTTTTCTATGCTTGTAAACTAAAATCACATTTTCCTAGCTATAATTAGTGTAGGTATCTTTTGCGATGTAATTCATATTACACCTCCTAGGTGCTTTTGCCCTTAACTCTTTCTTCTGCAGATATCTTTCGCCCCTTTTCTGGTTTCCGTGAGGTGAGATTGGTCAACAAGGAGATTAGGCATGTAAGTTAAATGCTACCTGTGAACCAAATTTTCCCTGTTATTTTTTGCAAAGCCAAGCATGCTTACATGTCAAATCCCCTCTCTGTTTTGCAGGCTGGAAGCTGTAACCTCTTGTGTTTTGTTGATTTTTCATCTCCTCCTGAAGCTCGTGCTGCTCTGGAGACTCTGCAAG