Search result

BaseInfo

ncRNA ID	osa_circ_039931
Species	Oryza sativa
Class	circRNA
Genome position	9:20625270-20632721[+/+]
Reference genome	RGAPv7
Source	PlantcircBase
Method	find_circ
Type	exonic
Splice junction sequence	GTCTGTGTGTTTTGCAGTGATCACCAGTTACTACTAAGGAAAGGTGTTCGGTGATGCCACTAAGATCATGGTTCCAGGGACGATGCAAAGGCAATGGAACAATCCCCTCTCTGTTTTGCAGGCTGGAAGCTGTAACCTCTTGTGTTTTGTTGATTTTTCATCTCCTCCTGAAGCTCGTGCTGCTCTGGAGACTCTGCAAG
Tissues	root
Exon boundary	Yes-Yes
Splicing signals	AG-GT
circRNA sequence	NA
Genomic sequence	GTCTGTGTGTTTTGCAGTGATCACCAGTTACTACTAAGGAAAGGTGTTCGGTGATGCCACTAAGATCATGGTTCCAGGGACGATGCAAAGGCAATGGAACATGTTTCACTGAGGTTCTCATTCAGGGCAAAGGGGAATTGCTCTTCGGAGCTATGTGAATTTGGTAAGTGGTACCCTTCTTAGAGTGGTCTATTCCATGGTGCAACAGCTTATGCATCATACAGATTTTGGAATGGTTCTTATGTTATGATCGTTTTGATGTACTCCATTCATCCTAAACATATTTAAGCTTGTCTATCTACTTTTCTTTTTTCAGTTTGGCAGAAACACTGCTTCGTATGGTTGCAAGTGTATTCTAGCGTGAATTGTATTTTCTCAAGGTCTAAACTGTAACTGAATTTAAATTGTAATGCTTGGAGTGAATGTCTTAAGTTAAAAACTTTTGCTTTTTGTTTGAGTTAAGTACTCCCTTTGTTTCATATTATAAGTCGCTTTTTTTATAGTCAAACATCTTTAGGTTTAGTTAAGTTTATAGAAAAAATTAGCAATATCTATTCCACCAAATTAATTTCATTATATATAACATTGTATATTTGATAATATGTTTGTGTTGTATTGAAAATGTTGTTATATTTTTCTGTAAACTTAGACAAACTTAAAAAAAGAGTTGATTAGGAAAAATGTCAAAACGAATGACTTATGGTATGAAACGCAACGCGGGGAGTATATGGCTATGGTACAAAGACATTGTAACTACAGAAGTATATTGATTTGCCCCTCTTTTCTACTTCGAGCGGATGAGATGAAGTTTACTCCGCTCCACGAAGAGTTGATTTTTACAAAATTCCGGACAAATTAGCATCATGATGAAAAGATGTCGAAGCCATCCAATAAGCCCCTTGATTGGTTGCGACCTTTCGTTAATTGCTTGGTGGACCCCTTGAAAATTCAACTTTTTATGGGACAGATTTCAGTTACTGTCGAATTCGTTTCAACTCGGACCTGCTTCGTTAATCATCTTATGCATATGCTTAAACTTGTAAGCAAATTTGAATTTGGCTCATATGCTCAAGTTTTGGAATACCGTAAACGAGGCACCATTTTACTTCTTACTAGTAGATTTGCTCGAGGCACCATTGTACTTCTTACCATATGTATCTTTCATGGCCTTGTTAGTATTTTAGTGTGAATGAATGCCGCAGCAAATAGCCAAGGTCCTTTTTAAAGAACATATATTAACAGGTTACTGATCTACGGAATCAACGGACATATTAGGGATCGGGAGTGTTTGAATTAGGGAGCACAAAATTACACCGACGCCATATGTCAATGATAGAGGGTTAAATATATCAGTGATAGGCAGTTGTTGTGGCAGATTTACTATCACCGACTACCAACATTTTGTCATCACCACCACCAACAATTAGAGCAAGGTCAATAGTGCAGCCCACTACTAGCTCTAAATCATCTTAGCTAATGTAATAGCCAATTCATACAATAGTTGCTTACTATACTATTTATATCTGGTCTCACCTATCATACACATATTACATCTTGGAGTTCGTACTGCAGCTGGCTACAGTTCTGTAGCCCGCTGCCCTTCTCTCTCTTCCTTTATCTCTTTAAAATATGTTTATAGCTGGCTTATAGCTTGCTATTGTACCTGCTGTTATAGCTGTGTAGATTAGTTTTGGCAAATTTTGCCACAGGATATTGTGACTTTGCAGTTTTAGCCGTAGGACACCGCGCGAAGTGACTTTTGGAGGAATACACTCTCAAAATGTGGTTATTTGCTGGTGGACACCGCACCCATTAAATTAGTAATTTCCGGTTGAATAGGAGAGATAAATTGTGTGAAATTTCTAAAATGTCCTTTGGCCCACATGTCAGGTCTTTCTTCTCTCTATCCCCTCCTTCCACACTGCAATGGCTAGCGCTTCTCCGTCCTCTATGTCAACGCGAAGGAGATGGCTCGTGCTGGGCTAACCCACAAGCAGGAATCCGAAGAGGGAGGCCAGCTGATTGGAGTCGTACGCCGGCGAGGGAGGGAGCGCCACGCGCTGGGTGACGCCGTGGGGTCAGGGAGCGGAGCAGAGAAGAGCTGGGCGTGGGGGCGGGGCGGTGGCAGTCGTGTACGGCGGCGGCGGCAGTCGTGTACGGCGGCGGCGGCGGCCTTCTTCTGCTGTACCTGGTGCCGCATAGCCACGCCAGCCGTTGCTCCGCCATCGCGCCAGCCGCCGCTCCTGCACGAGTGCGCCACCGCGTCGCGCGCTGCCCTGCGATGCATCGCCGGCCGCCCGCATCGCGCCGCACAGTTGCCGCGAGCCGCGCCGTCCACTACTCCACCTTCGCGCTAGCCGCCGCTCCTGCACAAGTGCGCCTAATGCCCTGTGCCGCGGGCTGCTCGTATCGCCCAATGCCCTTCACCGGCCGCTCGCATCGCCCGCTGCCCTATGCCGAGCAGCCACGCCGGTCGTTGCTCCGCCATCGCGCCGACCGCCGCTCCTGCACGAGTGCGTCCCTGCGTCGCGCGCCGGCCGCCTGCATCACGCCGCACGGTCGCCGCAAGCCGCGCCAGCCGCTGCTCCACCTTCGCGCTGGCCGCTGCTCCTAGACGAGTGTGCCATCGCATCACCCACCGCCCTCTGTCGCGTCGCCAGTCGCCTGCATCGCGTGCCGCGTTGCGCCGCACGGTCATCGCGAGCCGCGCCATCGAGGGAGAGAGAGGAAGAAGATAGGAAGAGAAAGAGGAATAAGGGGCAATTTGGTAAGTCATGTAAAAAAGTGGAGCCATCTCGTCTACTCAGCACCGAAATCATTAATTTAATGGGTGCGGTGTCCACCATCAAATAACCACATTTTGAGAGTGTTTTCCCCAAAAAATTACTTCGCGCGATGTCCTACAGCTAAAACCACAAAGTCACGATGTCATGTGGCAAAATTTGCCATTAGTTTTTCAGGCTTTTGCTTGGCCGGCTCAACATCCAACGCTCCGATGACAACTGTGGCTGAAGGCAAGGCCCAGCCCTATAGACGCTGGCCTCCACCATGTTCCAAAGAAAGGCCCGGCCCAAAACCAACTGTGGCTGAAGGCAAGGCCCAGCCCTATAGGCGCAGGCCTCCACCATGTTCCAAAGAAAGGCCCGGCCCAATACCCAGCGAATCCCATGCAAAAGGAAAAAAGTTATACCTGACTTCCCTCGTCTTGTCGCTGAATTACAAAATCATCCCTGAACCAAAAAACGAGATATATAGCATCTCTCAACTTAGAAAACTAGGCTCTCTAGGTCTTTAGGTGATTTTGTCTTTGGTTTTTACCGACGTGATAGCTGAGTCAGTATTGGACCCCATATGAGCCATACATGTTAGTGACTACTTCCCTTCCTCTCTCTCTCCACCTCTCTTCATCTCTTCTCCAGTCCTCTCCATCTGAGGTGTGCAACGGTCGACGAGGAGAAGGGCCAGCGCGGCGAGCGCGACCGGCGACGGGCGGGGAGAACTGGAGGCGCGCGGTGCCCGACGGTGGCCCTCGCTGACAGCGACGACGCTTGTTGGTGACGACGAGCAAGGAGAAGAACGGTGGCCGGTGGAGAGGAGCTAGGAGTCAGCAGCGTCACTAAGCTTGACCGGTAATGGCGAGGAAAGCGGGAGCCCATCCCCCCAACGACGGTGGGCTCACGAAGGATGTCTGGGCAGGGGTGCCGTCAGCGAGAGCTTGATGGAGCCGGAGAAGAGGGGGCGAAGATCTAGGAGGGGAAGTAGAGAGGCCCGCTGCCGCCGCCAATGTGTAGCTCCTCTCCATCGGTCACTACTCGTAGCGGCAAGGAGGAGGAGGAGTGGCCTAAGGTGTTGGATATCGGGCGGCGACGAGCAAGAGGGAGGAGTAGTTTGGCGGCGACATCAGTGTGGTTGGCTGGTCGTTGCGTGGCCACCGCCTCCTCCCGAGCTGCTTTGCCTAGCGACCAGCCCCGGTGATCTCTTCCTGTGCCGCCTCTCCCCCGCCACCTCCGCGACCGGCTGACTACCCGTGCCGGTATCTACCTCGACGACCCTTTCCCATGCCGCCTCTCCGCCGCTCCCCGTTGCTACGACCGGCTGCCTCGTCACGCCGGCATCTGTCGCTCTGCACCGGCCTGATGTGAGAACGGGGAGAATGAGAAGAGTTTATGTCATTGACATGTAGGTCCCACGTTAAGTCAGCTACCACGTCGGCCAAAACCGGAGTCAATGCCGCCATAGGAGGGACCTCAGGTATACTTTTCCCCACGCAAAAACTACCCAGCCCATCATCACGGCCCATGCAGGCCCGACACGCTTGTCGAAGGCAGCCCACACTGCACAACTTCTCTCTCCCTCCAGCCGTCACGCGCGCCGCGCCGCGCCGTAGCGCGCGTCCACACCAGCGCGGCGCGGCGCAACGCGGTGCCCGCGCGCCGCTTGCTCCCCCCTCCTCGCGCTCCACGCGCGCCCGCGCTCGCCGCCAGCGCGCGCTGCCCCGGAGCGCGACGACAGCTGTGTGGGGGGCAGCGACAGCGCCACTGGCGTCAGCACCAGTAACCGAAGCCGCGCTCGCTGGCTACAAAACACGCGCCCCCTCCTCCCCTCACCGCGGCTGCGCACGCATTCCCCATTCCCCATTCCCCTATCTCTCGAACCCTAGCCCCTAGTCCCCTCCCGAACCCTAGCCCCCACCGCGCCGCCGCCGCCGCCCTCCCGATCGCGATGGCCGCCGAGAGCTACTGGCAGTACCAGTACGCCGCCGTCGACCCGCGCCAGCAGGCGCCGGCGCCGGTGCCTGTGCCCACGCCCGCGCTCATGTGGCAGCAGCAGCAGCAGCAGGCGGGGTATCAGCCCGCCGTGGCGCCGGTCGCGCCCCCGATGGCTGCTCCGCCACTGCCCGCCGGCCCCCCGCCGTCGTTCAAGCGCCAGCGCCCGGAGTACTTCGGTTCGTGCTCGCCCACACATTCCTCCTCTTCTTGATTGTTAATTTTGTGTTGCCTGCTAGATTAGTCGTAAGAAAGTATAGGTAGCTTTGTTGTGGGTATCCATGGGGTTTAGGGCTTTAGGCTATAGAACATATAGATGATGATAGTGGAAGCTAGTCTTTTTTTATAAGCAGATCTTGTTGTCCTGAACTTTTGGGGTTCAGGGCGAGAAAAAATCAGAGGCCTTTTATTTGAATGTATCATCATCAGTAATCTTAATAAATTGCAAATATCCCTCATGTTTGAATTACAGATCCAGATATTATCAGTTATAAGTCTGAAACTCTGAATAATAGGGAGCAGAATCACCTGGATTTTTGTGATCTTGTAGAAACCGAAATATCATCAAGAACTCGTGGAAGCCAATCTCCTCAAGGGTATAATCTGTTAGAGGACTCCTAAAAAGGGAAAACACACACACACACCAACTATAGAAAATCAGTGCAAAGCTATGAGATAAACCAACCAACCACTCAACTCAAGGAGATCTTGCTGACTAACTAGAGAAACTAATTATTATGAACAACTCACAGGAATGAGGAATTCATAACCAATCAACTCTAATGGCAATCTTTAGAACCAAAAGAAATCAAAGTTCCATCTTTTTTTTGTCAATCTTCTTTGGGGTGTTATTCAACCCTGAAGCAAAGGAGTGAGATCTAAAAAACTTAAAGAGTACGACATATGCAGTGGCTGAATGACGGGATTACATGCAGCAAATGACACACTTAATTAGGCTTTAGTCATGCTAGCTAACCCAGCGTAGTTTCGGGAATAGATAAGGGTCGAGGGGAATGAGATAGCTTCGATGCTTCGTGACCTGCGCAGACTGATATGCTTGTTGGACATCTGCTAATGAGGCTTGGGCTTCCAAACAATACGTGTGTGGTCTGGGGCCCTGACTGCCCTGACTCAGGGCCGGCCTTGTGTTTTCCCTGCCACGCTGTACTATTAACCTGTCCAAGGAAATGGTAGGAGAAGTTGCAGGCTTGTAGTTTTGAATTGTTCCAATGGTAGATGTTTGTTTGAAATGAATACATAAAAATGAAACCATTCCTCATTTCCTGATAAAGCCTCAATGTCGTAAGATGGGAACTAGTAATTTTCATATGTGAATCTACAAGATCATATTGATTCTTTGTTTTCTTTAAAGTTAGATGGTGTAGCATGGTTTATATGATATGTTAGATTGAATTAATCTCTGGTTAGGCTAATATTTCACTATCATTGGTAGGCTCTAGGCAAAAGGTTTCGGCTTCTATTATAGAGTAGTCGGTCTGACTATTTTGATGGCTAAATGGTTTGTAAATTCTGAAATCTAAAACAAGAGAAAAAAAAAGGAATTTGTTGTGTAAAAAGGTTCTAATAATCTCTACAAAGGAATTTGCTGCTTGCATGCCGTTACGTTGTTTGCCGCCAATTCTGAATGCATCTATCATCACAACAATAAAGTTTAGTCCTTTTTTAGTATCATTTTATTGGGAAAATGATTGCTTGCTATGCACAGCTACCTGAAACTATGTATCAGGATTGCCTACCTGCACATAGATTTGGCGGCTTTTTAGTTGTTAGATAATGTTGTAATTACCGCACATCATTAATTCTTCACATGTTTGCTTCTATTGCAACCCCATTTTTGTCATAGCTTGCTTCTTAAATGGACAGGGAAAAAATATTGACGAGACTGTTCAGTAGTTTCTTCCTAATGTATTTTCTCCAAGTGAGATGTTCATTTGTTTCAGTCAAAAAAAAAAGATGTGCATTTGTATATTTTAACACTTTACACTTTGTTTGCAGACATGCCTTCTGGACAGGGAAACAGCCTCTTCCACGAAGCAATGAGCCCCCATTATGTCCATCGCTTGAACAATCAGGTATTATATCAATTATAAGCTTGTTAATTTGAGGATAGCAACTTTCTTACTAACATAGTGCTGGTTGCAGATGTCCTATGCTGCTGGTGCTAACCAAAGTGCTATTCCACTTGGTGGGATGGCCACATATTCAGCAGGCATGGACAGTGGAAACCATGGCGCTACAATAACTGAATCAAGAACTCTCTATGTGGAAGGACTACCTTCGAACTGCACAAAGAGAGAGGTTGCACGTATCCTTTTCTATGCTTGTAAACTAAAATCACATTTTCCTAGCTATAATTAGTGTAGGTATCTTTTGCGATGTAATTCATATTACACCTCCTAGGTGCTTTTGCCCTTAACTCTTTCTTCTGCAGATATCTTTCGCCCCTTTTCTGGTTTCCGTGAGGTGAGATTGGTCAACAAGGAGATTAGGCATGTAAGTTAAATGCTACCTGTGAACCAAATTTTCCCTGTTATTTTTTGCAAAGCCAAGCATGCTTACATGTCAAATCCCCTCTCTGTTTTGCAGGCTGGAAGCTGTAACCTCTTGTGTTTTGTTGATTTTTCATCTCCTCCTGAAGCTCGTGCTGCTCTGGAGACTCTGCAAG