ncRNA ID | novel_gma_miR1280 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:52417748-52417831 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451642;SRR2045237 |
Length | 24 |
Mature sequence(if miRNA) | 61 - AAGCCCGAUUUGAACGUUGACCGU - 84 |
Stem-loop(if miRNA) |
--     CG    GA        -   -    CUCAGAUGGUUG   AAGCC  AUUU  ACGUUGAC CGU UAAC            A   |||||  ||||  |||||||| ||| ||||   UUUGG  UGAG  UGCAACUG GCA UGUA            U CC     --    UC        U   C    ACUGUACACCGU |
Stem-loop sequence | AAGCCCGAUUUGAACGUUGACCGUUAACCUCAGAUGGUUGAUUGCCACAUGUCAAUGUCACGUGUCAACGUCUGAGUGGUUUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006583894.2 |
|
1.5 | PREDICTED: Glycine max probable WRKY transcription factor 3 (LOC100802109), mRNA | probable WRKY transcription factor 3(LOC100802109) | coding protein | psRNATarget |