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BaseInfo

ncRNA ID novel_gma_miR1279
Species Glycine max
Class miRNA
Genome position Chr1:52417747-52417832 [-]
Reference genome Glycine_max_v2.0
Source SRR1451642;SRR1294483;SRR1294484;SRR2045374
Length 24
Mature sequence(if miRNA) 63 - AAAGCCCGAUUUGAACGUUGACCG - 86
Stem-loop(if miRNA) --A     CG    GA        -   -    CUCAGAUGGUUG
   AAGCC  AUUU  ACGUUGAC CGU UAAC            A
   |||||  ||||  |||||||| ||| ||||
   UUUGG  UGAG  UGCAACUG GCA UGUA            U
UCC     --    UC        U   C    ACUGUACACCGU
Stem-loop sequence AAAGCCCGAUUUGAACGUUGACCGUUAACCUCAGAUGGUUGAUUGCCACAUGUCAAUGUCACGUGUCAACGUCUGAGUGGUUUCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006583894.2
ncRNA:24   GCCAGUUGCAAGUUUAGCCCGAAA   1
  |*|||||||||=|||||||||||*
targets:2570   CAGUCAACGUUUAAAUCGGGCUUC   2593

2.5 PREDICTED: Glycine max probable WRKY transcription factor 3 (LOC100802109), mRNA probable WRKY transcription factor 3(LOC100802109) coding protein psRNATarget