ncRNA ID | novel_gma_miR1279 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:52417747-52417832 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451642;SRR1294483;SRR1294484;SRR2045374 |
Length | 24 |
Mature sequence(if miRNA) | 63 - AAAGCCCGAUUUGAACGUUGACCG - 86 |
Stem-loop(if miRNA) |
--A     CG    GA        -   -    CUCAGAUGGUUG    AAGCC  AUUU  ACGUUGAC CGU UAAC            A    |||||  ||||  |||||||| ||| ||||    UUUGG  UGAG  UGCAACUG GCA UGUA            U UCC     --    UC        U   C    ACUGUACACCGU |
Stem-loop sequence | AAAGCCCGAUUUGAACGUUGACCGUUAACCUCAGAUGGUUGAUUGCCACAUGUCAAUGUCACGUGUCAACGUCUGAGUGGUUUCCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006583894.2 |
|
2.5 | PREDICTED: Glycine max probable WRKY transcription factor 3 (LOC100802109), mRNA | probable WRKY transcription factor 3(LOC100802109) | coding protein | psRNATarget |