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BaseInfo

ncRNA ID	novel_gma_miR1277
Species	Glycine max
Class	miRNA
Genome position	Chr15:4359975-4360059 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451642
Length	21
Mature sequence(if miRNA)	1 - UAAUUUCCAAAAGGUCCCUAU - 21
Stem-loop(if miRNA)	--     UC         C  A UG     A  C     CUA   UAAUU  CAAAAGGUC CU U  UUAAA UU UUUAA   A   |||||  ||||||||| || |  ||||| || |||||   C   AUUAA  GUUUUCCAG GA A  AAUUU AA AAAUU   A AA     GA         A  C GU     A  A     AAG
Stem-loop sequence	UAAUUUCCAAAAGGUCCCUAUUGUUAAAAUUCUUUAACUAACAGAAUUAAAAAAAUUUAAUGACAGAGACCUUUUGAGAAUUAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006605449.2	ncRNA:21   UAUCCCUGGAAAACCUUUAAU   1   **|||||*||||||||||||| targets:609   UAAGGGAACUUUUGGAAAUUA   629 Target Full Sequence	1.0	PREDICTED: Glycine max cytochrome c6, chloroplastic-like (LOC100797820), transcript variant X4, mRNA	cytochrome c6, chloroplastic-like(LOC100797820)	coding protein	psRNATarget
XM_006605448.2	ncRNA:21   UAUCCCUGGAAAACCUUUAAU   1   **|||||*||||||||||||| targets:703   UAAGGGAACUUUUGGAAAUUA   723 Target Full Sequence	1.0	PREDICTED: Glycine max cytochrome c6, chloroplastic-like (LOC100797820), transcript variant X1, mRNA	cytochrome c6, chloroplastic-like(LOC100797820)	coding protein	psRNATarget
XM_014772325.1	ncRNA:21   UAUCCCUGGAAAACCUUUAAU   1   **|||||*||||||||||||| targets:730   UAAGGGAACUUUUGGAAAUUA   750 Target Full Sequence	1.0	PREDICTED: Glycine max cytochrome c6, chloroplastic-like (LOC100797820), transcript variant X2, mRNA	cytochrome c6, chloroplastic-like(LOC100797820)	coding protein	psRNATarget
XM_014772326.1	ncRNA:21   UAUCCCUGGAAAACCUUUAAU   1   **|||||*||||||||||||| targets:738   UAAGGGAACUUUUGGAAAUUA   758 Target Full Sequence	1.0	PREDICTED: Glycine max cytochrome c6, chloroplastic-like (LOC100797820), transcript variant X3, mRNA	cytochrome c6, chloroplastic-like(LOC100797820)	coding protein	psRNATarget
XM_006582796.2	ncRNA:21   UAUCCCUGGAAAACCUUUAAU   1   *||||||*||||||||||*|| targets:859   UUAGGGAACUUUUGGAAAAUA   879 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100500456 (LOC100500456), transcript variant X1, mRNA	uncharacterized LOC100500456(LOC100500456)	coding protein	psRNATarget
NM_001253178.2	ncRNA:21   UAUCCCUGGAAAACCUUUAAU   1   *|**|*||||||||||||||| targets:312   UUCUGCACCUUUUGGAAAUUA   332 Target Full Sequence	3.0	Glycine max cytochrome P450 71D11-like (LOC100818520), mRNA	cytochrome P450 71D11-like(LOC100818520)	coding protein	psRNATarget
BT097056.1	ncRNA:21   UAUCCCUGGAAAACCUUUAAU   1   *|**|*||||||||||||||| targets:313   UUCUGCACCUUUUGGAAAUUA   333 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-21F5 unknown mRNA	NA	coding protein	psRNATarget