ncRNA ID |
osa_circ_039880 |
Species |
Oryza sativa |
Class |
circRNA |
Genome position |
9:20338805-20339134[-] |
Reference genome |
RGAPv7 |
Source |
PlantcircBase
|
Method |
circseq_cup |
Type |
exonic |
Splice junction sequence |
TAGTTGTGCTCCACTCACACATGAAACCAACATGATACCAGCACCTGAAAAAAGACCAATTCAGAGTTCTCTATATAACCATCAATATTTCTCATGTAAGGCTATAGCATCTGGTCTTTGTATAGCCTCAATGAAATCCTTAACACTTGAGTTTACACCCACTGCAAACATCAAGAATCCCAATGCTGGTGCATAATATC |
Tissues |
root |
Exon boundary |
No-No |
Splicing signals |
GA-TG |
circRNA sequence |
TAGTTGTGCTCCACTCACACATGAAACCAACATGATACCAGCACCTAAAGCAGTAGGAAGATTGAAAATTGTAACTGCAAGAGTGCCAAAAAGGAATCCTAAGAAAGGCTTGATAATAAATTGTCCAACATAGCCAGCAGCTATAGCATCTGGTCTTTGTATAGCCTCAATGAAATCCTTAACACTTGAGTTTACACCCACTGCAAACATCAAGAATCCCAATGCTGGTGCATAATATC |
Genomic sequence |
TAGTTGTGCTCCACTCACACATGAAACCAACATGATACCAGCACCTGAAAAAAGACCAATTCAGAGTTCTCTATATAACCATCAATATTTCTCATGTAAGCATAATAAATACTAGGATAAATTCAACTCCCCTACCTAAAGCAGTAGGAAGATTGAAAATTGTAACTGCAAGAGTGCCAAAAAGGAATCCTAAGAAAGGCTTGATAATAAATTGTCCAACATAGCCAGCAGCTATAGCATCTGGTCTTTGTATAGCCTCAATGAAATCCTTAACACTTGAGTTTACACCCACTGCAAACATCAAGAATCCCAATGCTGGTGCATAATATC |