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BaseInfo

ncRNA ID osa_circ_039880
Species Oryza sativa
Class circRNA
Genome position 9:20338805-20339134[-]
Reference genome RGAPv7
Source PlantcircBase
Method circseq_cup
Type exonic
Splice junction sequence TAGTTGTGCTCCACTCACACATGAAACCAACATGATACCAGCACCTGAAAAAAGACCAATTCAGAGTTCTCTATATAACCATCAATATTTCTCATGTAAGGCTATAGCATCTGGTCTTTGTATAGCCTCAATGAAATCCTTAACACTTGAGTTTACACCCACTGCAAACATCAAGAATCCCAATGCTGGTGCATAATATC
Tissues root
Exon boundary No-No
Splicing signals GA-TG
circRNA sequence TAGTTGTGCTCCACTCACACATGAAACCAACATGATACCAGCACCTAAAGCAGTAGGAAGATTGAAAATTGTAACTGCAAGAGTGCCAAAAAGGAATCCTAAGAAAGGCTTGATAATAAATTGTCCAACATAGCCAGCAGCTATAGCATCTGGTCTTTGTATAGCCTCAATGAAATCCTTAACACTTGAGTTTACACCCACTGCAAACATCAAGAATCCCAATGCTGGTGCATAATATC
Genomic sequence TAGTTGTGCTCCACTCACACATGAAACCAACATGATACCAGCACCTGAAAAAAGACCAATTCAGAGTTCTCTATATAACCATCAATATTTCTCATGTAAGCATAATAAATACTAGGATAAATTCAACTCCCCTACCTAAAGCAGTAGGAAGATTGAAAATTGTAACTGCAAGAGTGCCAAAAAGGAATCCTAAGAAAGGCTTGATAATAAATTGTCCAACATAGCCAGCAGCTATAGCATCTGGTCTTTGTATAGCCTCAATGAAATCCTTAACACTTGAGTTTACACCCACTGCAAACATCAAGAATCCCAATGCTGGTGCATAATATC