ncRNA ID | novel_gma_miR1275 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr11:26970542-26970638 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294479 |
Length | 19 |
Mature sequence(if miRNA) | 1 - AUAAUAUUGGAUUCUAGUC - 19 |
Stem-loop(if miRNA) |
--         UGUUCAAUAAAA    A -  AUUUGUAAACAGUUUUAGA   UUAGAAUUC            AAAA U GU                   U   |||||||||            |||| | ||                   C   GAUCUUAGG            UUGG A AA                   U CU         ----UUAUAAUA    - G  AAGAGAGUAGUUCGGCUUG |
Stem-loop sequence | UUAGAAUUCUGUUCAAUAAAAAAAAAUGUAUUUGUAAACAGUUUUAGAUCUGUUCGGCUUGAUGAGAGAAAAGAGGUUAUAAUAUUGGAUUCUAGUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003521925.3 |
|
2.5 | PREDICTED: Glycine max cytochrome P450 83B1-like (LOC100801312), mRNA | cytochrome P450 83B1-like(LOC100801312) | coding protein | psRNATarget | |||||||||
XM_006573557.2 |
|
3.0 | PREDICTED: Glycine max probable disease resistance protein At5g66900 (LOC106794124), mRNA | probable disease resistance protein At5g66900(LOC106794124) | coding protein | psRNATarget |