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BaseInfo

ncRNA ID novel_gma_miR1275
Species Glycine max
Class miRNA
Genome position Chr11:26970542-26970638 [-]
Reference genome Glycine_max_v2.0
Source SRR1294479
Length 19
Mature sequence(if miRNA) 1 - AUAAUAUUGGAUUCUAGUC - 19
Stem-loop(if miRNA) --         UGUUCAAUAAAA    A -  AUUUGUAAACAGUUUUAGA
  UUAGAAUUC            AAAA U GU                   U
  |||||||||            |||| | ||                   C
  GAUCUUAGG            UUGG A AA                   U
CU         ----UUAUAAUA    - G  AAGAGAGUAGUUCGGCUUG
Stem-loop sequence UUAGAAUUCUGUUCAAUAAAAAAAAAUGUAUUUGUAAACAGUUUUAGAUCUGUUCGGCUUGAUGAGAGAAAAGAGGUUAUAAUAUUGGAUUCUAGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003521925.3
ncRNA:19   CUGAUCUUAGGUUAUAAUA   1
  |*|||||||||||*|||||
targets:1555   GUCUAGAAUCCAAAAUUAU   1573

2.5 PREDICTED: Glycine max cytochrome P450 83B1-like (LOC100801312), mRNA cytochrome P450 83B1-like(LOC100801312) coding protein psRNATarget
XM_006573557.2
ncRNA:19   CUGAUCUUAGGUUAUAAUA   1
  ||=*|*|||||||||||||
targets:798   GAUAAAAAUCCAAUAUUAU   816

3.0 PREDICTED: Glycine max probable disease resistance protein At5g66900 (LOC106794124), mRNA probable disease resistance protein At5g66900(LOC106794124) coding protein psRNATarget