Search result

BaseInfo

ncRNA ID osa_circ_039837
Species Oryza sativa
Class circRNA
Genome position 9:20087721-20089665[-]
Reference genome RGAPv7
Source PlantcircBase
Method SMALT and Segemehl/find_circ/NA
Type exonic
Splice junction sequence CATCTATACGATGAACAAGTTCTTTCAACCTGAAAACAAGGCGCTGAATTCCTGGTTGAGCAAAGGTGTAATGGTCTTGCATACCATCGAGAAACTTTGAACGATCATTCTCATAGCGCGGGGAGTATTCAGGAGGTGAAAGAGGTTCTGATCTTCGGGTCAGCAAGACCTTCCCAGGAAAGCTCCGCCCTTTGAGCATT
Tissues leaf and panicle/root/shoot, root
Exon boundary Yes-Yes
Splicing signals AC-CT
circRNA sequence NA
Genomic sequence CATCTATACGATGAACAAGTTCTTTCAACCTGAAAACAAGGCGCTGAATTCCTGGTTGAGCAAAGGTGTAATGGTCTTGCATACCATCGAGAAACTTTGAAAGACACCAATAACAGTCCGCTTCAATATTAGAAACATCCTGTGGAGAAAGCTTTTCCATGGACCAGGTGTCCATGTTGCCCTCTAGATGCTCTGATAAGAATACGACCAAGAATGGTGTAAGAAGGTCGTTTATTCCTTGAACATAACCACTTGCTGGATGACGGATGGCCCTGGAAATGGTGAGTCACTGTATCACGGAATAATACAGAAAAGAAACAAACAATTGTAGGTAGTGGTGGCGGCATTGTGTTGATGCCAACATAATTGATCCTTGTTGGAACTTGGAAGAGAACACTAATGTGGAACTGATGGAACAAGCATAACTGCCAAAAGAACAGGCACCTTGTACTGATATCAACACAATGTATATCAAACATAACCTAAACACCTTATTAGACCAACTTGGGAAATTTGAACTAGTCATCAGAGATGACAAGTCATGTATCATGCAAACTCCACCCATTTATCACATTTTCCCTCTAGAATGATGAAACAGTGCCAGGTTAACTATGAGAGGTTCACAAACGTGTATGTTCTGCATAGGGAACCACAAGGGGAGTAGCACAAGCAGGAATTGTGCATCATGGAAAAATGTCATGTTTTCTTAGCTAGATTGTGTGTTAAACAAGGATTCTGACAAATCAAAATGAACCAGCAAAGGGCGGTGACTCACCATGTATACAAAATGCGCTCCAGAGATTTCTGAATTTGAGGGTGCTGGAAAAAGGTAACATCTGGCACAGTTCTTGGGCAATCAACAGCAATCTACAAGTGAAACCATGAGTTTATATAATTGATTACATGAACTATTGGGGAACCTAAAAAGGCAAATTCAAAGTCGAAAAAGTCAGGGGAAACCTGTCGAAGCATATTAATCTCTTCATCAGAGCGTTCAGTATCAGGAATATCATAGTATTGAGAAACACATTCAACGTACTCAAGTCTTTTCCTCGTCAGAACACCTTCTCTTCTATCTGCATTAGGTGGTGCATATCCCTGTAGCCAGCTGACATTAAATTCGAAACAGGAACACCTATTAAAAGGATTGAAACATGTCTTGAAATAAGCTCACCAGAAGAAGTCTCCATATATTAGGTCGCATATAAGGTGGAACACCACTCCAAGACAGTTCCCGCAACTTGTCTAAAAAATTAAGAACAAACAGTGGGTTTCAACTGAATTCTGGACAAGCTAATGGAACCTAGAAGAATCAGAGAAACTGCAAATATTTTTCAGAATGAACAAGCTGCAACAAAATACAGGGGCAACAACTCACAAGACACAAGATTGTCACCCTACATAAAGTTTATACCCTTTTCCATCCATCTTGGCAGTGACAATGATGAAAAAGAAAATGACAAGAAAATAATCGAAACATTGATTGCTAAACCAAAATTATTGTACACCCAACAGATGATTTAATCAACCCTGTACAGAAAATAGGCATACCTAATATAACAGCTGGCCTAGATAGTTCGTTCGTGAATTTAGCAATTCGTGCAGAATCTGTAGCTCTAGCCCCAGAAACTAATCCTTGGGCATCTGGTAATGAATTGGTGCTACTTGTTGATGGAGGATTTGATTTCTTTGCACTCATACTATCAGCTGTGTTTCCAGATGCTTGCCCTTTTCCCTGTATAAAATGAAGTTCATCAATTACAAACTAACTTGTTTACAAGCTGAAAGCGATGCCAACCAATGCCACATTACTTCTTGTGAGCCTTCATTCTGTTCGTATTCATCACGATCATTCTCATAGCGCGGGGAGTATTCAGGAGGTGAAAGAGGTTCTGATCTTCGGGTCAGCAAGACCTTCCCAGGAAAGCTCCGCCCTTTGAGCATT