Search result

BaseInfo

ncRNA ID osa_circ_039825
Species Oryza sativa
Class circRNA
Genome position 9:20033045-20034127[+]
Reference genome RGAPv7
Source PlantcircBase
Method SMALT and Segemehl/find_circ/NA
Type exonic
Splice junction sequence GTTCATATGGCAGTCATTCTGTATAACTATTACCACCGGAAGCAGTTCCCACAGCTTGCTTTTGCTGATGCAATGAGGTTCTTCAAATGTGCATCTCTTATGACTAAAAAAGGGACAACTACAAAGCTGTTCATCTTACAGTACGAGCAAACTGCAAAAGGCAACTTCGCGGAAATGCCTATTGAAGAATTGATCAAGAG
Tissues panicle/root/root, seed
Exon boundary Yes-Yes
Splicing signals AG-GT
circRNA sequence NA
Genomic sequence GTTCATATGGCAGTCATTCTGTATAACTATTACCACCGGAAGCAGTTCCCACAGCTTGCTTTTGCTGATGCAATGAGGTTCTTCAAATGTGCATCTCTTACTCTTGGTGACAGTTTGCTCGCGTACTCCAATATGGTCCACCAACATGAGAAGAGTTCTGGAAGTCCTGGGGAGGGTGTGAATCTCTCTGTGACTGACAAAGCAGTCGTGGATGCGTGTGGAATTGCTGAAGCCCTCGACGCAAACCAAGACTCTCCAGACATGGCCATGTGGCCAATTTCAAAGGTCGCTGTGCTTCTTCTTGATTCAACTAGGAAAAGATGTCTGCTGGAGAGTGGTTCTGTCGGTAAAAATGTTCGCTCCCTTTTGGAGAAAGAGATTGACACATCTAGCACTAGTGAGCATGGCAGCAACAAGCCAGAAGGACAAGATTTAGAAAATGAAGAGACTGGACCATATGTCCTCCAAAAGTTAGCATTTTCAGAGGTGGAGCGTAGAACAGGTTGTTACTATACCATTTTGCTCTATTTTGTTTTCCATGTGTGGCTATTTTCTTAACTAAACAAATTTTGCCCTCTTTTTTTCATTATCAGTGTGCTTCATCCGTTGAGACTTTTGCACCCCCAGTATGTTAGTTTCATTCGATTTGAACTATTCAATTAGCTTCGGACCATGCCTATGTAGCTTGAAAACTTTGGTTAGTTGAAAATTACCAACCAGAAAAGCTATTGGTCCCGAAACATGAATTTATAGCATTGCTGATACATCAATAAATAACTAGGAACATTGTAGTGTTTAATTTCCCTTGTAAATGATATGGGCTGATATCAACCAATTCTCTGTTCGACTATATTATTTTATCTGCTTTATTTTTCATTTATGAATCATATAACTGAAATTAATGTATTTCATTTCTGTGATTTTCTTAATAGAGATTAAGCGGTCAAGCTTGCGTCTTCTTGATGAGCATTTAGCATACTCATTGACTAAAAAAGGGACAACTACAAAGCTGTTCATCTTACAGTACGAGCAAACTGCAAAAGGCAACTTCGCGGAAATGCCTATTGAAGAATTGATCAAGAG