ncRNA ID | novel_gma_miR1271 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:4546516-4546666 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451642 |
Length | 24 |
Mature sequence(if miRNA) | 128 - AAGAGACAAUAGAAUAACCAGACC - 151 |
Stem-loop(if miRNA) |
--A      UC    C          C  AC       G  C    - A  -U    A   UAAUA     UU   U    UUGGUU  UUUG UGUCUUUUUU CA  UGUUCUU UG UGUU C UG  AGUU UGU     UUUAA  UUG G    ||||||  |||| |||||||||| ||  ||||||| || |||| | ||  |||| |||     |||||  ||| A    GACCAA  AGAU ACAGAGAAAA GU  ACAGGGA AU ACAA G AC  UUAA ACG     AAAUU  AAC U CCA      UA    A          A  CA       G  A    A A  UU    C   --UCA     UU   U |
Stem-loop sequence | AUUGGUUUCUUUGCUGUCUUUUUUCCAACUGUUCUUGUGCUGUUCAUGUAGUUAUGUUAAUAUUUAAUUUUGUGAUUCAAUUUUAAAACUGCACAAUUUUCAAGAAACAAUAGAGGGACAACUGAAAAAGAGACAAUAGAAUAACCAGACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014766816.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized mitochondrial protein AtMg00810-like (LOC106795887), mRNA | uncharacterized mitochondrial protein AtMg00810-like(LOC106795887) | coding protein | psRNATarget | |||||||||
XM_014772485.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized mitochondrial protein AtMg00810-like (LOC106797658), mRNA | uncharacterized mitochondrial protein AtMg00810-like(LOC106797658) | coding protein | psRNATarget |